GtRNAdb

tRNAscan-SE Analysis of Aeropyrum pernix

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tRNAscan-SE Run Options & Statistics

tRNA Summary for Your organism

tRNAs decoding Standard 20 AA:            51
Selenocysteine tRNAs (TCA):               0
Possible suppressor tRNAs (CTA,TTA):      0
tRNAs with undetermined/unknown isotypes: 1
Predicted pseudogenes:                    0
                                          -------
Total tRNAs:                              52

tRNAs with introns:     	14

| Pro-GGG: 1 | Pro-CGG: 1 | Thr-CGT: 1 | Thr-TGT: 1 | Ser-CGA: 1 | Arg-TCT: 1 | Lys-CTT: 1 | Lys-TTT: 1 | Asp-GTC: 1 | Met-CAT: 2 | Tyr-GTA: 1 | Cys-GCA: 1 | Trp-CCA: 1 |


Isotype Counts:

Ala   : 3	  AGC:         GGC: 1       CGC: 1       TGC: 1     
Gly   : 3	  ACC:         GCC: 1       CCC: 1       TCC: 1     
Pro   : 3	  AGG:         GGG: 1       CGG: 1       TGG: 1     
Thr   : 4	  AGT:         GGT: 1       CGT: 1       TGT: 2     
Val   : 5	  AAC:         GAC: 1       CAC: 2       TAC: 2     
Ser   : 4	  AGA:         GGA: 1       CGA: 1       TGA: 1       ACT:         GCT: 1                               
Arg   : 7	  ACG:         GCG: 1       CCG: 3       TCG: 1                                 CCT: 1       TCT: 1     
Leu   : 5	  AAG:         GAG: 1       CAG: 1       TAG: 1                                 CAA: 1       TAA: 1     
Phe   : 1	  AAA:         GAA: 1                               
Asn   : 1	  ATT:         GTT: 1                               
Lys   : 2	                            CTT: 1       TTT: 1     
Asp   : 1	  ATC:         GTC: 1                               
Glu   : 2	                            CTC: 1       TTC: 1     
His   : 1	  ATG:         GTG: 1                               
Gln   : 2	                            CTG: 1       TTG: 1     
Ile   : 1	  AAT:         GAT: 1                    TAT:       
Met   : 3	                            CAT: 3                  
Tyr   : 1	  ATA:         GTA: 1                               
Supres: 0	                            CTA:         TTA:       
Cys   : 1	  ACA:         GCA: 1                               
Trp   : 1	                            CCA: 1                  
SelCys: 0	                                         TCA:       


The Genomic tRNA Database is curated by Todd Lowe and Patricia Chan. Please email lowe@soe.ucsc.edu with any questions and comments. To submit corrections, please use our Bug and Request Tracking System.