GtRNAdb

tRNAscan-SE Analysis of Aeromonas salmonicida A449

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tRNA Gene Summary





tRNAs Decoding Standard 20 AA108
Selenocysteine tRNAs (TCA)1
Possible suppressor tRNAs (CTA,TTA)1
tRNAs with undetermined
or unknown isotypes
0
Predicted pseudogenes0
Total tRNAs110


Intron Summary

tRNAs with introns
0


Four Box tRNA Sets

IsotypetRNA Count by AnticodonTotal
AlaAGC
 
GGC
4
CGC
 
TGC
3
7
GlyACC
 
GCC
7
CCC
1
TCC
2
10
ProAGG
 
GGG
2
CGG
1
TGG
2
5
ThrAGT
 
GGT
2
CGT
1
TGT
1
4
ValAAC
 
GAC
3
CAC
 
TAC
4
7

Six Box tRNA Sets

IsotypetRNA Count by AnticodonTotal
SerAGA
 
GGA
3
CGA
1
TGA
2
ACT
 
GCT
1
 
 
 
 
7
ArgACG
3
GCG
 
CCG
1
TCG
 
 
 
 
 
CCT
1
TCT
1
6
LeuAAG
 
GAG
1
CAG
6
TAG
1
 
 
 
 
CAA
2
TAA
1
11

Two Box tRNA Sets

IsotypetRNA Count by AnticodonTotal
PheAAA
 
GAA
3
 
 
 
 
3
AsnATT
 
GTT
5
 
 
 
 
5
Lys 
 
 
 
CTT
1
TTT
3
4
AspATC
 
GTC
3
 
 
 
 
3
Glu 
 
 
 
CTC
 
TTC
6
6
HisATG
 
GTG
2
 
 
 
 
2
Gln 
 
 
 
CTG
 
TTG
5
5

Two Box & Other tRNA Sets

IsotypetRNA Count by AnticodonTotal
IleAAT
 
GAT
3
 
 
TAT
 
3
Met 
 
 
 
CAT
12
 
 
12
TyrATA
 
GTA
5
 
 
 
 
5
Supres 
 
 
 
CTA
1
TTA
 
1
CysACA
 
GCA
2
 
 
 
 
2
Trp 
 
 
 
CCA
1
 
 
1
SelCys 
 
 
 
 
 
TCA
1
1

The Genomic tRNA Database is curated by Todd Lowe and Patricia Chan. Please email lowe@soe.ucsc.edu with any questions and comments. To submit corrections, please use our Bug and Request Tracking System.