GtRNAdb

tRNAscan-SE Analysis of Anopheles gambiae

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tRNA Gene Summary





tRNAs Decoding Standard 20 AA414
Selenocysteine tRNAs (TCA)0
Possible suppressor tRNAs (CTA,TTA)0
tRNAs with undetermined
or unknown isotypes
0
Predicted pseudogenes8
Total tRNAs422


Intron Summary

tRNAs with introns
27
Leu
CAA
3
Ile
TAT
2
Tyr
GTA
22


Four Box tRNA Sets

IsotypetRNA Count by AnticodonTotal
AlaAGC
17
GGC
 
CGC
6
TGC
3
26
GlyACC
 
GCC
15
CCC
 
TCC
8
23
ProAGG
7
GGG
 
CGG
13
TGG
8
28
ThrAGT
8
GGT
 
CGT
5
TGT
2
15
ValAAC
31
GAC
 
CAC
29
TAC
3
63

Six Box tRNA Sets

IsotypetRNA Count by AnticodonTotal
SerAGA
6
GGA
 
CGA
8
TGA
2
ACT
 
GCT
6
 
 
 
 
22
ArgACG
10
GCG
 
CCG
 
TCG
8
 
 
 
 
CCT
2
TCT
2
22
LeuAAG
5
GAG
 
CAG
10
TAG
3
 
 
 
 
CAA
3
TAA
2
23

Two Box tRNA Sets

IsotypetRNA Count by AnticodonTotal
PheAAA
 
GAA
9
 
 
 
 
9
AsnATT
 
GTT
11
 
 
 
 
11
Lys 
 
 
 
CTT
17
TTT
8
25
AspATC
 
GTC
20
 
 
 
 
20
Glu 
 
 
 
CTC
15
TTC
11
26
HisATG
 
GTG
21
 
 
 
 
21
Gln 
 
 
 
CTG
11
TTG
4
15

Two Box & Other tRNA Sets

IsotypetRNA Count by AnticodonTotal
IleAAT
12
GAT
 
 
 
TAT
2
14
Met 
 
 
 
CAT
18
 
 
18
TyrATA
 
GTA
22
 
 
 
 
22
Supres 
 
 
 
CTA
 
TTA
 
0
CysACA
 
GCA
5
 
 
 
 
5
Trp 
 
 
 
CCA
6
 
 
6
SelCys 
 
 
 
 
 
TCA
 
0

The Genomic tRNA Database is curated by Todd Lowe and Patricia Chan. Please email lowe@soe.ucsc.edu with any questions and comments. To submit corrections, please use our Bug and Request Tracking System.