GtRNAdb

tRNAscan-SE Analysis of Bacillus subtilis

>> Main Overview
>> tRNAs by Isotype
>> tRNAs by Locus
>> Secondary Structures
>> tRNA Alignments
>> FASTA Seqs
>> Run Options/Stats
>> Analysis Notes
>> Modomics tRNA Modifications
>> UCSC Genome Browser
>> Genome DB
>> Genome Seq
Structurally Aligned tRNAs (by Isotype & Anticodon)

Structural alignments are generated by aligning tRNA sequences against domain-specific tRNA covariance models with the use of COVE.


[Ala] [Arg] [Asn] [Asp] [Cys] [Gln] [Glu] [Gly] [His] [Ile] [Leu] [Lys] [Met] [Phe] [Pro] [Ser] [Thr] [Trp] [Tyr] [Val]
[Suppressor] [Selenocysteine]


Ala tRNAs

>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGGCCATAGCTCAGCTGGGAGAGCGCTACGCTGGCAGCGTAGAG...........GtCAGGGGTTCGAGCCCCCTTGGCTCCA... chr.trna63-AlaGGC Sc: 77.43 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGGCCTTAGCTCAGCTGGGAGAGCGCCTGCTTTGCACGCAGGAG...........GtCAGCGGTTCGATCCCGCTAGGCTCCACCA chr.trna5-AlaTGC Sc: 92.94 GGGGCCTTAGCTCAGCTGGGAGAGCGCCTGCTTTGCACGCAGGAG...........GtCAGCGGTTCGATCCCGCTAGGCTCCACCA chr.trna22-AlaTGC Sc: 92.94 GGGGCCTTAGCTCAGCTGGGAGAGCGCCTGCTTTGCACGCAGGAG...........GtCAGCGGTTCGATCCCGCTAGGCTCCACCA chr.trna2-AlaTGC Sc: 92.94 GGGGCCTTAGCTCAGCTGGGAGAGCGCCTGCTTTGCACGCAGGAG...........GtCAGCGGTTCGATCCCGCTAGGCTCCACCA chr.trna16-AlaTGC Sc: 92.94 GGGGCCTTAGCTCAGCTGGGAGAGCGCCTGCTTTGCACGCAGGAG...........GtCAGCGGTTCGATCCCGCTAGGCTCCA... chr.trna72-AlaTGC Sc: 84.64

Arg tRNAs

>>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<...................>>>>>.......<<<<<.<<<<<<<.... GCGCCCGTAGCTCAATTGGAtA.GAGCGTTTGACTACGGATCAAAAG..............GtTAGGGGTTCGACTCCTCT.CGGGCGCGCCA chr.trna70-ArgACG Sc: 81.43 GCGCCCGTAGCTCAATTGGAtA.GAGCGTTTGACTACGGATCAAAAG..............GtTAGGGGTTCGACTCCTCT.CGGGCGCGCCA chr.trna35-ArgACG Sc: 81.43 GCGCCCGTAGCTCAATTGGAtA.GAGCGTTTGACTACGGATCAAAAG..............GtTAGGGGTTCGACTCCTCT.CGGGCGCGCCA chr.trna20-ArgACG Sc: 81.43 GCGCCCGTAGCTCAATTGGAtA.GAGCGTTTGACTACGGATCAAAAG..............GtTAGGGGTTCGACTCCTCT.CGGGCGCGCCA chr.trna14-ArgACG Sc: 81.43 >>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<...................>>>>>.......<<<<<.<<<<<<<.... GCGCTCGTAGCTCAGTTGGAtA.GAGCGGTGGTTTCCGGTACCACG.TCT...........GtCGGGGGTTCGAATCCCTC.CGAGCGCG... chr.trna62-ArgCCG Sc: 66.66 >>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<...................>>>>>.......<<<<<.<<<<<<<.... GCTCTAGTAGCACAGC.GGAtA.GTGCAGCAGTTTCCTAAACTGCAG..............GtCGGGAGTTCGAATCTCTC.CTAGAGCG... chr.trna86-ArgCCT Sc: 69.33 >>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<...................>>>>>.......<<<<<.<<<<<<<.... GTCCCAGTAGCTCAGCTGGAtA.GAGCAACGGCCTTCTAAGCCGTCG..............GtCGGGAGTTCGAATCTCTC.CTGGGACG... chr.trna85-ArgTCT Sc: 83.12

Asn tRNAs

>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... TCCGCAGTAGCTCAGTGGTA.GAGCTATCGGCTGTTAACCGATCG...........GtCGTAGGTTCGAATCCTACCTGCGGAGCCA chr.trna39-AsnGTT Sc: 88.32 TCCACAGTAGCTCAGTGGTA.GAGCTATCGGCTGTTAACCGATCG...........GtCGCAGGTTCGAATCCTGCCTGTGGAGCCA chr.trna82-AsnGTT Sc: 87.08 TCCACAGTAGCTCAGTGGTA.GAGCTATCGGCTGTTAACCGATCG...........GtCGCAGGTTCGAATCCTGCCTGTGGAGCCA chr.trna28-AsnGTT Sc: 87.08 TCCGCAGTAGCTCAGTGGTA.GAGCTATCGGCTGTTAACCGATCG...........GtCGTAGGTTCGAATCCTACCTGCGGAG... chr.trna17-AsnGTT Sc: 80.02

Asp tRNAs

>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGTCCGGTAGTTCAGTTGGTtAGAATGCCTGCCTGTCACGCAGGAG...........GtCGCGGGTTCGAGTCCCGTCCGGACCGCCA chr.trna77-AspGTC Sc: 95.80 GGTCCGGTAGTTCAGTTGGTtAGAATGCCTGCCTGTCACGCAGGAG...........GtCGCGGGTTCGAGTCCCGTCCGGACCGCCA chr.trna60-AspGTC Sc: 95.80 GGTCCGGTAGTTCAGTTGGTtAGAATGCCTGCCTGTCACGCAGGAG...........GtCGCGGGTTCGAGTCCCGTCCGGACCGCCA chr.trna44-AspGTC Sc: 95.80 GGTCCGGTAGTTCAGTTGGTtAGAATGCCTGCCTGTCACGCAGGAG...........GtCGCGGGTTCGAGTCCCGTCCGGACCGCCA chr.trna38-AspGTC Sc: 95.80

Cys tRNAs

>>>>>>>..>>>..........<<<.>>>>>.......<<<<<...............>>>>>.......<<<<<.<<<<<<<.... GGCGGCATAGCCAAGTGGTA.AGGCAGAGGTCTGCAAAACCTTT...........AtCCCCGGTTCGAATCCGGG.TGTCGCCT... chr.trna52-CysGCA Sc: 67.07

Gln tRNAs

>>>>>>>..>>>..........<<<.>>>>>.......<<<<<................>>>>>.......<<<<<.<<<<<<<.... TGGGCTATAGCCAAGCGGTA.AGGCAACGGACTTTGACTCCGTCA...........TgCGTTGGTTCGAATCCAGC.TAGCCCAGCCA chr.trna31-GlnTTG Sc: 75.97 TGGGCTATAGCCAAGCGGTA.AGGCAACGGACTTTGACTCCGTCA...........TgCGTTGGTTCGAATCCAGC.TAGCCCAGTCA chr.trna27-GlnTTG Sc: 68.29 TGGGCTATAGCCAAGCGGTA.AGGCAACGGACTTTGACTCCGTCA...........TgCGTTGGTTCGAATCCAGC.TAGCCCAG... chr.trna50-GlnTTG Sc: 67.67 TGGGCTATAGCCAAGCGGTA.AGGCAATGGACTTTGACTCCGTG............AtCGTTGGTTCGAATCCAGC.TAGCCCAG... chr.trna57-GlnTTG Sc: 65.47

Glu tRNAs

>>>>>>>..>>>...........<<<.>>>>>.......<<<<<...............>>>>>.......<<<<<<<<<<<<.... GGCCCGTTGGTCAAGCGGTtA.AGACACCGCCCTTTCACGGCGGTA...........ACACGGGTTCGAATCCCGTACGGGTCA... chr.trna84-GluTTC Sc: 70.15 GGCCCGTTGGTCAAGCGGTtA.AGACACCGCCCTTTCACGGCGGTA...........ACACGGGTTCGAATCCCGTACGGGTCA... chr.trna7-GluTTC Sc: 70.15 GGCCCGTTGGTCAAGCGGTtA.AGACACCGCCCTTTCACGGCGGTA...........ACACGGGTTCGAATCCCGTACGGGTCA... chr.trna59-GluTTC Sc: 70.15 GGCCCGTTGGTCAAGCGGTtA.AGACACCGCCCTTTCACGGCGGTA...........ACACGGGTTCGAATCCCGTACGGGTCA... chr.trna41-GluTTC Sc: 70.15 GGCCCGTTGGTCAAGCGGTtA.AGACACCGCCCTTTCACGGCGGTA...........ACACGGGTTCGAATCCCGTACGGGTCA... chr.trna30-GluTTC Sc: 70.15 >>>>>>>..>>.............<<.>>>.>.......<.<<<...............>>>>>.......<<<<<<<<<<<<.... GGCCCGTTGGT.AAACGGTtA.A.GCACCGCCCTTTCACG.CGGTA...........ACACGGGTTCGAATCCCGTACGGGTCACCA chr.trna23-GluTTC Sc: 48.71

Gly tRNAs

>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<.<<<<<<<.... GCGGAAGTAGTTCAGTGGTA.GAACACCACCTTGCCAAGGTGGGG...........GtCGCGGGTTCGAATCCCGT.CTTCCGCTCCA chr.trna68-GlyGCC Sc: 94.93 GCGGAAGTAGTTCAGTGGTA.GAACACCACCTTGCCAAGGTGGGG...........GtCGCGGGTTCGAATCCCGT.CTTCCGCTCCA chr.trna51-GlyGCC Sc: 94.93 GCGGAAGTAGTTCAGTGGTA.GAACACCACCTTGCCAAGGTGGGG...........GtCGCGGGTTCGAATCCCGT.CTTCCGCTCCA chr.trna19-GlyGCC Sc: 94.93 GCGGAAGTAGTTCAGTGGTA.GAACACCACCTTGCCAAGGTGGGG...........GtCGCGGGTTCGAATCCCGT.CTTCCGCTCCA chr.trna12-GlyGCC Sc: 94.93 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<.<<<<<<<.... GCGGGTGTAGTTTAGTGGTA.AAACCTCAGCCTTCCAAGCTGAT............GtCGTGGGTTCGATTCCCAT.CACCCGCTCCA chr.trna80-GlyTCC Sc: 81.36 GCGGGTGTAGTTTAGTGGTA.AAACCTCAGCCTTCCAAGCTGAT............GtCGTGAGTTCGATTCTCAT.CACCCGCTCCA chr.trna55-GlyTCC Sc: 78.55 GCGGGTGTAGTTTAGTGGTA.AAACCTCAGCCTTCCAAGCTGAT............GtCGTGAGTTCGATTCTCAT.CACCCGCTCCA chr.trna36-GlyTCC Sc: 78.55

His tRNAs

>>>>>>>..>>>...........<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCGGTTGTGGCGAAGTGGTtA.ACGCACCAGATTGTGGCTCTGGCA...........TtCGTGGGTTCGATTCCCATCAATCGCCCCA chr.trna79-HisGTG Sc: 74.51 GCGGTTGTGGCGAAGTGGTtA.ACGCACCAGATTGTGGCTCTGGCA...........CtCGTGGGTTCGATTCCCATCAATCGCCCCA chr.trna49-HisGTG Sc: 72.51

Ile tRNAs

>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCCTGTAGCTCAGCTGGTtAGAGCGCACGCCTGATAAGCGTGAG...........GtCGGTGGTTCGAGTCCACTCAGGCCCACCA chr.trna4-IleGAT Sc: 102.39 GGGCCTGTAGCTCAGCTGGTtAGAGCGCACGCCTGATAAGCGTGAG...........GtCGGTGGTTCGAGTCCACTCAGGCCCACCA chr.trna1-IleGAT Sc: 102.39 GGGCCTGTAGCTCAGCTGGTtAGAGCGCACGCCTGATAAGCGTGAG...........GtCGATGGTTCGAGTCCATTCAGGCCCACCA chr.trna81-IleGAT Sc: 102.00

Leu tRNAs

>>>>>>>..>>>............<<<.>>>>>.......<<<<<.>>>>.........<<<<..>>>>>.......<<<<<.<<<<<<<.... GCGGTCGTGGCGGAAT.GGCaG.ACGCGCTAGGTTGAGGGCCTAGTGGGT.GAATa...ACCCGTGGAGGTTCAAGTCCTCT.CGGCCGCATCA chr.trna34-LeuGAG Sc: 53.73 >>>>>>>..>>>............<<<.>>>>>.......<<<<<.>>>>.........<<<<..>>>>>.......<<<<<.<<<<<<<.... GCGGATGTGGCGGAATTGGCaG.ACGCGCTAGAATCAGGCTCTAGTGTCT.TTAC....AGACGTGGGGGTTCAAGTCCCTT.CATCCGCACCA chr.trna67-LeuCAG Sc: 72.49 >>>>>>>..>>>............<<<.>>>>>.......<<<<<.>>>...........<<<..>>>>>.......<<<<<.<<<<<<<.... GCGGGTGTGGCGGAATTGGCaG.ACGCGCTAGACTTAGGATCTAGTGTC..TTAC.....GACGTGGGGGTTCGAGTCCCTT.CACCCGCA... chr.trna33-LeuTAG Sc: 73.07 GCGGGTGTGGCGGAATTGGCaG.ACGCGCTAGACTTAGGATCTAGTGTC..TTTAt....GACGTGGGGGTTCAAGTCCCTT.CACCCGCA... chr.trna11-LeuTAG Sc: 69.29 >>>>>>>..>>>............<<<.>>>>>.......<<<<<.>>>...........<<<..>>>>>.......<<<<<.<<<<<<<.... GCCGGTGTGGCGGAATTGGCaG.GCGCGCACGACTCAAAATCGTGTTCC..TTCT.....GGAGTGTCGGTTCGACCCCGAC.CACCGGTA... chr.trna54-LeuCAA Sc: 55.51 >>>>>>>..>>>............<<<.>>>>>.......<<<<<.>>>>>.......<<<<<..>>>>>.......<<<<<.<<<<<<<.... GCCGGGGTGGTGGAATTGGCaG.ACACACAGGACTTAAAATCCTGCGGTAGGTGA...CTACCGTGCCGGTTCAAGTCCGGC.CCTCGGCACCA chr.trna53-LeuTAA Sc: 76.51 GCCGGGGTGGTGGAATTGGCaG.ACACACAGGACTTAAAATCCTGCGGTAGGTGA...CTACCGTGCCGGTTCAAGTCCGGC.CCTCGGCA... chr.trna69-LeuTAA Sc: 68.21 GCCGGGGTGGTGGAATTGGCaG.ACACACAGGACTTAAAATCCTGCGGTAGGTGA...CTACCGTGCCGGTTCAAGTCCGGC.CCTCGGCA... chr.trna13-LeuTAA Sc: 68.21

Lys tRNAs

>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GAGCCATTAGCTCAGTTGGTAGAGCATCTGACTTTTAATCAGAGG...........GtCGAAGGTTCGAGTCCTTCATGGCTCACCA chr.trna66-LysTTT Sc: 98.67 GAGCCATTAGCTCAGTTGGTAGAGCATCTGACTTTTAATCAGAGG...........GtCGAAGGTTCGAGTCCTTCATGGCTCACCA chr.trna58-LysTTT Sc: 98.67 GAGCCATTAGCTCAGTTGGTAGAGCATCTGACTTTTAATCAGAGG...........GtCGAAGGTTCGAGTCCTTCATGGCTCACCA chr.trna32-LysTTT Sc: 98.67 GAGCCATTAGCTCAGTTGGTAGAGCATCTGACTTTTAATCAGAGG...........GtCGAAGGTTCGAGTCCTTCATGGCTCACCA chr.trna10-LysTTT Sc: 98.67

Met tRNAs

>>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGACCTTTAGCTCAGTT.GGTtAGAGCAGACGGCTCATAACCGTCCG...........GtCGTAGGTTCGAGTCCTACAAGGTCCACCA chr.trna74-MetCAT Sc: 97.54 .>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<..... CGCGGGGTGGAGCAGTTcGGT.AGCTCGTCGGGCTCATAACCCGAAG...........GtCGCAGGTTCAAATCCTGCCCCCGCAACCA chr.trna76-MetCAT Sc: 90.17 CGCGGGGTGGAGCAGTTcGGT.AGCTCGTCGGGCTCATAACCCGAAG...........GtCGCAGGTTCAAATCCTGCCCCCGCAACCA chr.trna43-MetCAT Sc: 90.17 CGCGGGGTGGAGCAGTTcGGT.AGCTCGTCGGGCTCATAACCCGAAG...........GtCGCAGGTTCAAATCCTGCCCCCGCAACCA chr.trna37-MetCAT Sc: 90.17 >>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGCGGTGTAGCTCAGCT.GGCtAGAGCGTACGGTTCATACCCGTGAG...........GtCGGGGGTTCGATCCCCTCCGCCGCTACCA chr.trna73-MetCAT Sc: 83.99 GGCGGTGTAGCTCAGCT.GGCtAGAGCGTACGGTTCATACCCGTGAG...........GtCGGGGGTTCGATCCCCTCCGCCGCTACCA chr.trna6-MetCAT Sc: 83.99

Phe tRNAs

>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGCTCGGTAGCTCAGTTGGTAGAGCAACGGACTGAAAATCCGTGT...........GtCGGCGGTTCGATTCCGTCCCGAGCCACCA chr.trna78-PheGAA Sc: 97.89 >>>>>>>..>>>..........<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGCTCGGTAGCTCAGTTGGTAAAGCAACGGACTGAAAATCCGTGT...........GtCGGCGGTTCGATTCCGTCCCGAGCCACCA chr.trna45-PheGAA Sc: 91.60 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGCTCGGTAGCTCAGTTGGTAGAGCAACGGACTGAAAATCCGTGT...........GtCGGCGGTTCGATTCCGTCCCGAGCCA... chr.trna61-PheGAA Sc: 89.60

Pro tRNAs

>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... CGGGAAGTAGCTCAGCTtGGTAGAGCACATGGTTTGGGACCATGGG...........GtCGCAGGTTCGAATCCTGTCTTCCCGACCA chr.trna71-ProTGG Sc: 94.72 CGGGAAGTAGCTCAGCTtGGTAGAGCACATGGTTTGGGACCATGGG...........GtCGCAGGTTCGAATCCTGTCTTCCCGACCA chr.trna21-ProTGG Sc: 94.72 CGGGAAGTAGCTCAGCTtGGTAGAGCACATGGTTTGGGACCATGGG...........GtCGCAGGTTCGAATCCTGTCTTCCCGACCA chr.trna15-ProTGG Sc: 94.72

SeC tRNAs

Ser tRNAs

>>>>>>>..>>>..............<<<.>>>>>.......<<<<<..>>>>>>......<<<<<<..>>>>>.......<<<<<..<<<<<<<.... GGAGAGCTGTCCGAGT..GGTcgA.AGGAGCACGATTGGAAATCGTGT.AGGCGGTCAAcTCCGTCT.CAAGGGTTCGAATCCCTT..GCTCTCCGCCA chr.trna40-SerGGA Sc: 64.16 >>>>>>>..>>>..............<<<.>>>>>.......<<<<<..>>>>..........<<<<..>>>>>.......<<<<<..<<<<<<<.... GGAGGAATACCCAAGTCtGGCtgA.AGGGATCGGTCTTGAAAACCGACAGGGTG.TCAA...AGCCCGCGGGGGTTCGAATCCCTC..TTCCTCCGCCA chr.trna75-SerTGA Sc: 74.88 >>>>>>>..>>>..............<<<.>>>>>.......<<<<<...>>>>........<<<<...>>>>>.......<<<<<..<<<<<<<.... GGAGGAATACCCAAGTCcGGCtgA.AGGGATCGGTCTTGAAAACCGACAGGGGTGTCAA..AGCCCG.CGGGGGTTCGAATCCCTC..TTCCTCCGCCA chr.trna3-SerTGA Sc: 71.03 >>>>>>>..>>>..............<<<.>>>>>.......<<<<<...>>>>>......<<<<<...>>>>>.......<<<<<..<<<<<<<.... GGAGAAGTACTCAAGT..GGCtgA.AGAGGCGCCCCTGCTAAGGGTGTAGGTCGTGTAA..GCGGCG.CGAGGGTTCAAATCCCTC..CTTCTCCGCCA chr.trna83-SerGCT Sc: 72.43 GGAGAAGTACTCAAGT..GGCtgA.AGAGGCGCCCCTGCTAAGGGTGTAGGTCGCGTAA..GCGGCG.CGAGGGTTCAAATCCCTC..CTTCTCCGCCA chr.trna29-SerGCT Sc: 71.43

Sup tRNAs

Thr tRNAs

>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCTTCCATAGCTCAGCAGGTAGAGCACTTCCATGGTAAGGAAGAG...........GtCAGCGGTTCGAGCCCGCTTGGAAGCT... chr.trna18-ThrGGT Sc: 75.20 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCCGGTGTAGCTCAATTGGTAGAGCAACTGACTTGTAATCAGTAG...........GtTGGGGGTTCAAGTCCTCTTGCCGGCACCA chr.trna9-ThrTGT Sc: 91.03 GCCGGTGTAGCTCAATTGGTAGAGCAACTGACTTGTAATCAGTAG...........GtTGGGGGTTCAAGTCCTCTTGCCGGCACCA chr.trna65-ThrTGT Sc: 91.03 GCCGGTGTAGCTCAATTGGTAGAGCAACTGACTTGTAATCAGTAG...........GtTGGGGGTTCAAGTCCTCTTGCCGGCA... chr.trna25-ThrTGT Sc: 82.73 >>>>>>>..>>>..........<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCCGGTGTAGCTCAATTGGTAAAGCAACTGACTTGTAATCAGTAG...........GtTGGGGGTTCAAGTCCTCTTGCCGGCA... chr.trna46-ThrTGT Sc: 76.44

Trp tRNAs

>>>>>>>..>>.>........<.<<.>>>>>.......<<<<<...............>>>>>.......<<<<<<<<<<<<.... AGGGGCATAGTGTAACGGTA.GAACAGAGGTCTCCAAAACCTCCG...........GTGTGGGTTCGATTCCTACTGCCCCTGCCA chr.trna48-TrpCCA Sc: 65.41

Tyr tRNAs

>>>>>>>..>>>............<<<.>>>>>.......<<<<<.>>>........<<<...>>>>>.......<<<<<.<<<<<<<.... GGAGGGGTAGCGAAGTGGCtaA.ACGCGGCGGACTGTAAATCCGCTCCCTCA.....GGGTtCGGCAGTTCGAATCTGCC.CCCCTCCACCA chr.trna47-TyrGTA Sc: 78.86 GGAGGGGTAGCGAAGTGGCtaA.ACGCGGCGGACTGTAAATCCGCTCCCTCA.....GGGTtCGGCAGTTCGAATCTGCC.CCCCTCCACCA chr.trna26-TyrGTA Sc: 78.86

Val tRNAs

>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GATTCCGTAGCTCAGCTGGGAGAGCGCTACCTTGACAGGGTAGAG...........GtCGCTGGTTCGAGCCCAGTCGGAATCA... chr.trna56-ValGAC Sc: 71.64 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGAGGATTAGCTCAGCTGGGAGAGCATCTGCCTTACAAGCAGAGG...........GtCGGCGGTTCGAGCCCGTCATCCTCCACCA chr.trna8-ValTAC Sc: 96.46 GGAGGATTAGCTCAGCTGGGAGAGCATCTGCCTTACAAGCAGAGG...........GtCGGCGGTTCGAGCCCGTCATCCTCCACCA chr.trna64-ValTAC Sc: 96.46 GGAGGATTAGCTCAGCTGGGAGAGCATCTGCCTTACAAGCAGAGG...........GtCGGCGGTTCGAGCCCGTCATCCTCCACCA chr.trna24-ValTAC Sc: 96.46 GGAGGATTAGCTCAGCTGGGAGAGCATTTGCCTTACAAGCAGAGG...........GtCGGCGGTTCGAGCCCGTCATCCTCCACCA chr.trna42-ValTAC Sc: 90.98

The Genomic tRNA Database is curated by Todd Lowe and Patricia Chan. Please email lowe@soe.ucsc.edu with any questions and comments. To submit corrections, please use our Bug and Request Tracking System.