GtRNAdb

tRNAscan-SE Analysis of Bacillus subtilis

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>> tRNAs by Isotype
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>> Secondary Structures
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>> Modomics tRNA Modifications
>> UCSC Genome Browser
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>> Genome Seq
Predicted tRNA Secondary Structures


Click on "View tRNA" buttons to view 2-D tRNA structures

Cove-predicted tRNA secondary structures rendered by NAVIEW (c) 1988 Robert E. Bruccoleri


chr.trna63 (3193566-3193494)	Length: 73 bp
Type: Ala	Anticodon: GGC at 34-36 (3193533-3193531)	Score: 77.43
Seq: GGGGCCATAGCTCAGCTGGGAGAGCGCTACGCTGGCAGCGTAGAGGtCAGGGGTTCGAGCCCCCTTGGCTCCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<.
                    
chr.trna72 (3172087-3172015)	Length: 73 bp
Type: Ala	Anticodon: TGC at 34-36 (3172054-3172052)	Score: 84.64
Seq: GGGGCCTTAGCTCAGCTGGGAGAGCGCCTGCTTTGCACGCAGGAGGtCAGCGGTTCGATCCCGCTAGGCTCCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<.
                    
chr.trna16 (96143-96218)	Length: 76 bp
Type: Ala	Anticodon: TGC at 34-36 (96176-96178)	Score: 92.94
Seq: GGGGCCTTAGCTCAGCTGGGAGAGCGCCTGCTTTGCACGCAGGAGGtCAGCGGTTCGATCCCGCTAGGCTCCACCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
                    
chr.trna2 (11550-11625)	Length: 76 bp
Type: Ala	Anticodon: TGC at 34-36 (11583-11585)	Score: 92.94
Seq: GGGGCCTTAGCTCAGCTGGGAGAGCGCCTGCTTTGCACGCAGGAGGtCAGCGGTTCGATCCCGCTAGGCTCCACCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
                    
chr.trna22 (166252-166327)	Length: 76 bp
Type: Ala	Anticodon: TGC at 34-36 (166285-166287)	Score: 92.94
Seq: GGGGCCTTAGCTCAGCTGGGAGAGCGCCTGCTTTGCACGCAGGAGGtCAGCGGTTCGATCCCGCTAGGCTCCACCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
                    
chr.trna5 (32018-32093)	Length: 76 bp
Type: Ala	Anticodon: TGC at 34-36 (32051-32053)	Score: 92.94
Seq: GGGGCCTTAGCTCAGCTGGGAGAGCGCCTGCTTTGCACGCAGGAGGtCAGCGGTTCGATCCCGCTAGGCTCCACCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
                    
chr.trna14 (95953-96029)	Length: 77 bp
Type: Arg	Anticodon: ACG at 35-37 (95987-95989)	Score: 81.43
Seq: GCGCCCGTAGCTCAATTGGAtAGAGCGTTTGACTACGGATCAAAAGGtTAGGGGTTCGACTCCTCTCGGGCGCGCCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
                    
chr.trna20 (166063-166139)	Length: 77 bp
Type: Arg	Anticodon: ACG at 35-37 (166097-166099)	Score: 81.43
Seq: GCGCCCGTAGCTCAATTGGAtAGAGCGTTTGACTACGGATCAAAAGGtTAGGGGTTCGACTCCTCTCGGGCGCGCCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
                    
chr.trna35 (634657-634733)	Length: 77 bp
Type: Arg	Anticodon: ACG at 35-37 (634691-634693)	Score: 81.43
Seq: GCGCCCGTAGCTCAATTGGAtAGAGCGTTTGACTACGGATCAAAAGGtTAGGGGTTCGACTCCTCTCGGGCGCGCCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
                    
chr.trna70 (3172261-3172185)	Length: 77 bp
Type: Arg	Anticodon: ACG at 35-37 (3172227-3172225)	Score: 81.43
Seq: GCGCCCGTAGCTCAATTGGAtAGAGCGTTTGACTACGGATCAAAAGGtTAGGGGTTCGACTCCTCTCGGGCGCGCCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
                    
chr.trna62 (3544994-3544919)	Length: 76 bp
Type: Arg	Anticodon: CCG at 35-37 (3544960-3544958)	Score: 66.66
Seq: GCGCTCGTAGCTCAGTTGGAtAGAGCGGTGGTTTCCGGTACCACGTCTGtCGGGGGTTCGAATCCCTCCGAGCGCG
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.......>>>>>.......<<<<<<<<<<<<.
                    
chr.trna86 (2002557-2002485)	Length: 73 bp
Type: Arg	Anticodon: CCT at 34-36 (2002524-2002522)	Score: 69.33
Seq: GCTCTAGTAGCACAGCGGAtAGTGCAGCAGTTTCCTAAACTGCAGGtCGGGAGTTCGAATCTCTCCTAGAGCG
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<.
                    
chr.trna85 (2898955-2898882)	Length: 74 bp
Type: Arg	Anticodon: TCT at 35-37 (2898921-2898919)	Score: 83.12
Seq: GTCCCAGTAGCTCAGCTGGAtAGAGCAACGGCCTTCTAAGCCGTCGGtCGGGAGTTCGAATCTCTCCTGGGACG
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<.
                    
chr.trna17 (165753-165824)	Length: 72 bp
Type: Asn	Anticodon: GTT at 33-35 (165785-165787)	Score: 80.02
Seq: TCCGCAGTAGCTCAGTGGTAGAGCTATCGGCTGTTAACCGATCGGtCGTAGGTTCGAATCCTACCTGCGGAG
Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<.
                    
chr.trna28 (528265-528339)	Length: 75 bp
Type: Asn	Anticodon: GTT at 33-35 (528297-528299)	Score: 87.08
Seq: TCCACAGTAGCTCAGTGGTAGAGCTATCGGCTGTTAACCGATCGGtCGCAGGTTCGAATCCTGCCTGTGGAGCCA
Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
                    
chr.trna82 (3171191-3171117)	Length: 75 bp
Type: Asn	Anticodon: GTT at 33-35 (3171159-3171157)	Score: 87.08
Seq: TCCACAGTAGCTCAGTGGTAGAGCTATCGGCTGTTAACCGATCGGtCGCAGGTTCGAATCCTGCCTGTGGAGCCA
Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
                    
chr.trna39 (950916-950990)	Length: 75 bp
Type: Asn	Anticodon: GTT at 33-35 (950948-950950)	Score: 88.32
Seq: TCCGCAGTAGCTCAGTGGTAGAGCTATCGGCTGTTAACCGATCGGtCGTAGGTTCGAATCCTACCTGCGGAGCCA
Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
                    
chr.trna38 (639952-640028)	Length: 77 bp
Type: Asp	Anticodon: GTC at 35-37 (639986-639988)	Score: 95.80
Seq: GGTCCGGTAGTTCAGTTGGTtAGAATGCCTGCCTGTCACGCAGGAGGtCGCGGGTTCGAGTCCCGTCCGGACCGCCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
                    
chr.trna44 (951376-951452)	Length: 77 bp
Type: Asp	Anticodon: GTC at 35-37 (951410-951412)	Score: 95.80
Seq: GGTCCGGTAGTTCAGTTGGTtAGAATGCCTGCCTGTCACGCAGGAGGtCGCGGGTTCGAGTCCCGTCCGGACCGCCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
                    
chr.trna60 (4153994-4153918)	Length: 77 bp
Type: Asp	Anticodon: GTC at 35-37 (4153960-4153958)	Score: 95.80
Seq: GGTCCGGTAGTTCAGTTGGTtAGAATGCCTGCCTGTCACGCAGGAGGtCGCGGGTTCGAGTCCCGTCCGGACCGCCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
                    
chr.trna77 (3171635-3171559)	Length: 77 bp
Type: Asp	Anticodon: GTC at 35-37 (3171601-3171599)	Score: 95.80
Seq: GGTCCGGTAGTTCAGTTGGTtAGAATGCCTGCCTGTCACGCAGGAGGtCGCGGGTTCGAGTCCCGTCCGGACCGCCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
                    
chr.trna52 (952115-952185)	Length: 71 bp
Type: Cys	Anticodon: GCA at 33-35 (952147-952149)	Score: 67.07
Seq: GGCGGCATAGCCAAGTGGTAAGGCAGAGGTCTGCAAAACCTTTAtCCCCGGTTCGAATCCGGGTGTCGCCT
Str: >>>>>>>..>>>.........<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<.
                    
chr.trna57 (2563122-2563192)	Length: 71 bp
Type: Gln	Anticodon: TTG at 33-35 (2563154-2563156)	Score: 65.47
Seq: TGGGCTATAGCCAAGCGGTAAGGCAATGGACTTTGACTCCGTGAtCGTTGGTTCGAATCCAGCTAGCCCAG
Str: >>>>>>>..>>>.........<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<.
                    
chr.trna50 (951914-951985)	Length: 72 bp
Type: Gln	Anticodon: TTG at 33-35 (951946-951948)	Score: 67.67
Seq: TGGGCTATAGCCAAGCGGTAAGGCAACGGACTTTGACTCCGTCATgCGTTGGTTCGAATCCAGCTAGCCCAG
Str: >>>>>>>..>>>.........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<.
                    
chr.trna27 (194536-194610)	Length: 75 bp
Type: Gln	Anticodon: TTG at 33-35 (194568-194570)	Score: 68.29
Seq: TGGGCTATAGCCAAGCGGTAAGGCAACGGACTTTGACTCCGTCATgCGTTGGTTCGAATCCAGCTAGCCCAGTCA
Str: >>>>>>>..>>>.........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
                    
chr.trna31 (528547-528621)	Length: 75 bp
Type: Gln	Anticodon: TTG at 33-35 (528579-528581)	Score: 75.97
Seq: TGGGCTATAGCCAAGCGGTAAGGCAACGGACTTTGACTCCGTCATgCGTTGGTTCGAATCCAGCTAGCCCAGCCA
Str: >>>>>>>..>>>.........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
                    
chr.trna23 (194197-194268)	Length: 72 bp
Type: Glu	Anticodon: TTC at 32-34 (194228-194230)	Score: 48.71
Seq: GGCCCGTTGGTAAACGGTtAAGCACCGCCCTTTCACGCGGTAACACGGGTTCGAATCCCGTACGGGTCACCA
Str: >>>>>>>..>>..........<<.>>>.>.......<<<<....>>>>>.......<<<<<<<<<<<<....
                    
chr.trna30 (528464-528535)	Length: 72 bp
Type: Glu	Anticodon: TTC at 34-36 (528497-528499)	Score: 70.15
Seq: GGCCCGTTGGTCAAGCGGTtAAGACACCGCCCTTTCACGGCGGTAACACGGGTTCGAATCCCGTACGGGTCA
Str: >>>>>>>..>>>..........<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<.
                    
chr.trna41 (951122-951193)	Length: 72 bp
Type: Glu	Anticodon: TTC at 34-36 (951155-951157)	Score: 70.15
Seq: GGCCCGTTGGTCAAGCGGTtAAGACACCGCCCTTTCACGGCGGTAACACGGGTTCGAATCCCGTACGGGTCA
Str: >>>>>>>..>>>..........<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<.
                    
chr.trna59 (4154147-4154076)	Length: 72 bp
Type: Glu	Anticodon: TTC at 34-36 (4154114-4154112)	Score: 70.15
Seq: GGCCCGTTGGTCAAGCGGTtAAGACACCGCCCTTTCACGGCGGTAACACGGGTTCGAATCCCGTACGGGTCA
Str: >>>>>>>..>>>..........<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<.
                    
chr.trna7 (70265-70336)	Length: 72 bp
Type: Glu	Anticodon: TTC at 34-36 (70298-70300)	Score: 70.15
Seq: GGCCCGTTGGTCAAGCGGTtAAGACACCGCCCTTTCACGGCGGTAACACGGGTTCGAATCCCGTACGGGTCA
Str: >>>>>>>..>>>..........<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<.
                    
chr.trna84 (3170997-3170926)	Length: 72 bp
Type: Glu	Anticodon: TTC at 34-36 (3170964-3170962)	Score: 70.15
Seq: GGCCCGTTGGTCAAGCGGTtAAGACACCGCCCTTTCACGGCGGTAACACGGGTTCGAATCCCGTACGGGTCA
Str: >>>>>>>..>>>..........<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<.
                    
chr.trna12 (95769-95843)	Length: 75 bp
Type: Gly	Anticodon: GCC at 33-35 (95801-95803)	Score: 94.93
Seq: GCGGAAGTAGTTCAGTGGTAGAACACCACCTTGCCAAGGTGGGGGtCGCGGGTTCGAATCCCGTCTTCCGCTCCA
Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
                    
chr.trna19 (165958-166032)	Length: 75 bp
Type: Gly	Anticodon: GCC at 33-35 (165990-165992)	Score: 94.93
Seq: GCGGAAGTAGTTCAGTGGTAGAACACCACCTTGCCAAGGTGGGGGtCGCGGGTTCGAATCCCGTCTTCCGCTCCA
Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
                    
chr.trna51 (952035-952109)	Length: 75 bp
Type: Gly	Anticodon: GCC at 33-35 (952067-952069)	Score: 94.93
Seq: GCGGAAGTAGTTCAGTGGTAGAACACCACCTTGCCAAGGTGGGGGtCGCGGGTTCGAATCCCGTCTTCCGCTCCA
Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
                    
chr.trna68 (3172445-3172371)	Length: 75 bp
Type: Gly	Anticodon: GCC at 33-35 (3172413-3172411)	Score: 94.93
Seq: GCGGAAGTAGTTCAGTGGTAGAACACCACCTTGCCAAGGTGGGGGtCGCGGGTTCGAATCCCGTCTTCCGCTCCA
Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
                    
chr.trna36 (634747-634820)	Length: 74 bp
Type: Gly	Anticodon: TCC at 33-35 (634779-634781)	Score: 78.55
Seq: GCGGGTGTAGTTTAGTGGTAAAACCTCAGCCTTCCAAGCTGATGtCGTGAGTTCGATTCTCATCACCCGCTCCA
Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<....
                    
chr.trna55 (966402-966475)	Length: 74 bp
Type: Gly	Anticodon: TCC at 33-35 (966434-966436)	Score: 78.55
Seq: GCGGGTGTAGTTTAGTGGTAAAACCTCAGCCTTCCAAGCTGATGtCGTGAGTTCGATTCTCATCACCCGCTCCA
Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<....
                    
chr.trna80 (3171367-3171294)	Length: 74 bp
Type: Gly	Anticodon: TCC at 33-35 (3171335-3171333)	Score: 81.36
Seq: GCGGGTGTAGTTTAGTGGTAAAACCTCAGCCTTCCAAGCTGATGtCGTGGGTTCGATTCCCATCACCCGCTCCA
Str: >>>>>>>..>>>>.......<<<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<....
                    
chr.trna49 (951829-951904)	Length: 76 bp
Type: His	Anticodon: GTG at 34-36 (951862-951864)	Score: 72.51
Seq: GCGGTTGTGGCGAAGTGGTtAACGCACCAGATTGTGGCTCTGGCACtCGTGGGTTCGATTCCCATCAATCGCCCCA
Str: >>>>>>>..>>>..........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
                    
chr.trna79 (3171453-3171378)	Length: 76 bp
Type: His	Anticodon: GTG at 34-36 (3171420-3171418)	Score: 74.51
Seq: GCGGTTGTGGCGAAGTGGTtAACGCACCAGATTGTGGCTCTGGCATtCGTGGGTTCGATTCCCATCAATCGCCCCA
Str: >>>>>>>..>>>..........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
                    
chr.trna81 (3171278-3171202)	Length: 77 bp
Type: Ile	Anticodon: GAT at 35-37 (3171244-3171242)	Score: 102.00
Seq: GGGCCTGTAGCTCAGCTGGTtAGAGCGCACGCCTGATAAGCGTGAGGtCGATGGTTCGAGTCCATTCAGGCCCACCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
                    
chr.trna1 (11462-11538)	Length: 77 bp
Type: Ile	Anticodon: GAT at 35-37 (11496-11498)	Score: 102.39
Seq: GGGCCTGTAGCTCAGCTGGTtAGAGCGCACGCCTGATAAGCGTGAGGtCGGTGGTTCGAGTCCACTCAGGCCCACCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
                    
chr.trna4 (31930-32006)	Length: 77 bp
Type: Ile	Anticodon: GAT at 35-37 (31964-31966)	Score: 102.39
Seq: GGGCCTGTAGCTCAGCTGGTtAGAGCGCACGCCTGATAAGCGTGAGGtCGGTGGTTCGAGTCCACTCAGGCCCACCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
                    
chr.trna54 (952547-952628)	Length: 82 bp
Type: Leu	Anticodon: CAA at 35-37 (952581-952583)	Score: 55.51
Seq: GCCGGTGTGGCGGAATTGGCaGGCGCGCACGACTCAAAATCGTGTTCCTTCTGGAGTGTCGGTTCGACCCCGACCACCGGTA
Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.>>>....<<<..>>>>>.......<<<<<<<<<<<<.
                    
chr.trna67 (3172537-3172451)	Length: 87 bp
Type: Leu	Anticodon: CAG at 35-37 (3172503-3172501)	Score: 72.49
Seq: GCGGATGTGGCGGAATTGGCaGACGCGCTAGAATCAGGCTCTAGTGTCTTTACAGACGTGGGGGTTCAAGTCCCTTCATCCGCACCA
Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.>>>>....<<<<..>>>>>.......<<<<<<<<<<<<....
                    
chr.trna34 (528897-528983)	Length: 87 bp
Type: Leu	Anticodon: GAG at 34-36 (528930-528932)	Score: 53.73
Seq: GCGGTCGTGGCGGAATGGCaGACGCGCTAGGTTGAGGGCCTAGTGGGTGAATaACCCGTGGAGGTTCAAGTCCTCTCGGCCGCATCA
Str: >>>>>>>..>>>..........<<<.>>>>>.......<<<<<.>>>>.....<<<<..>>>>>.......<<<<<<<<<<<<....
                    
chr.trna13 (95858-95943)	Length: 86 bp
Type: Leu	Anticodon: TAA at 35-37 (95892-95894)	Score: 68.21
Seq: GCCGGGGTGGTGGAATTGGCaGACACACAGGACTTAAAATCCTGCGGTAGGTGACTACCGTGCCGGTTCAAGTCCGGCCCTCGGCA
Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.>>>>>....<<<<<..>>>>>.......<<<<<<<<<<<<.
                    
chr.trna69 (3172356-3172271)	Length: 86 bp
Type: Leu	Anticodon: TAA at 35-37 (3172322-3172320)	Score: 68.21
Seq: GCCGGGGTGGTGGAATTGGCaGACACACAGGACTTAAAATCCTGCGGTAGGTGACTACCGTGCCGGTTCAAGTCCGGCCCTCGGCA
Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.>>>>>....<<<<<..>>>>>.......<<<<<<<<<<<<.
                    
chr.trna53 (952193-952281)	Length: 89 bp
Type: Leu	Anticodon: TAA at 35-37 (952227-952229)	Score: 76.51
Seq: GCCGGGGTGGTGGAATTGGCaGACACACAGGACTTAAAATCCTGCGGTAGGTGACTACCGTGCCGGTTCAAGTCCGGCCCTCGGCACCA
Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.>>>>>....<<<<<..>>>>>.......<<<<<<<<<<<<....
                    
chr.trna11 (95646-95728)	Length: 83 bp
Type: Leu	Anticodon: TAG at 35-37 (95680-95682)	Score: 69.29
Seq: GCGGGTGTGGCGGAATTGGCaGACGCGCTAGACTTAGGATCTAGTGTCTTTAtGACGTGGGGGTTCAAGTCCCTTCACCCGCA
Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.>>>.....<<<..>>>>>.......<<<<<<<<<<<<.
                    
chr.trna33 (528735-528816)	Length: 82 bp
Type: Leu	Anticodon: TAG at 35-37 (528769-528771)	Score: 73.07
Seq: GCGGGTGTGGCGGAATTGGCaGACGCGCTAGACTTAGGATCTAGTGTCTTACGACGTGGGGGTTCGAGTCCCTTCACCCGCA
Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.>>>....<<<..>>>>>.......<<<<<<<<<<<<.
                    
chr.trna10 (95564-95639)	Length: 76 bp
Type: Lys	Anticodon: TTT at 34-36 (95597-95599)	Score: 98.67
Seq: GAGCCATTAGCTCAGTTGGTAGAGCATCTGACTTTTAATCAGAGGGtCGAAGGTTCGAGTCCTTCATGGCTCACCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
                    
chr.trna32 (528648-528723)	Length: 76 bp
Type: Lys	Anticodon: TTT at 34-36 (528681-528683)	Score: 98.67
Seq: GAGCCATTAGCTCAGTTGGTAGAGCATCTGACTTTTAATCAGAGGGtCGAAGGTTCGAGTCCTTCATGGCTCACCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
                    
chr.trna58 (4154232-4154157)	Length: 76 bp
Type: Lys	Anticodon: TTT at 34-36 (4154199-4154197)	Score: 98.67
Seq: GAGCCATTAGCTCAGTTGGTAGAGCATCTGACTTTTAATCAGAGGGtCGAAGGTTCGAGTCCTTCATGGCTCACCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
                    
chr.trna66 (3172623-3172548)	Length: 76 bp
Type: Lys	Anticodon: TTT at 34-36 (3172590-3172588)	Score: 98.67
Seq: GAGCCATTAGCTCAGTTGGTAGAGCATCTGACTTTTAATCAGAGGGtCGAAGGTTCGAGTCCTTCATGGCTCACCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
                    
chr.trna6 (70179-70255)	Length: 77 bp
Type: Met	Anticodon: CAT at 35-37 (70213-70215)	Score: 83.99
Seq: GGCGGTGTAGCTCAGCTGGCtAGAGCGTACGGTTCATACCCGTGAGGtCGGGGGTTCGATCCCCTCCGCCGCTACCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
                    
chr.trna73 (3171994-3171918)	Length: 77 bp
Type: Met	Anticodon: CAT at 35-37 (3171960-3171958)	Score: 83.99
Seq: GGCGGTGTAGCTCAGCTGGCtAGAGCGTACGGTTCATACCCGTGAGGtCGGGGGTTCGATCCCCTCCGCCGCTACCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
                    
chr.trna37 (639815-639891)	Length: 77 bp
Type: Met	Anticodon: CAT at 35-37 (639849-639851)	Score: 90.17
Seq: CGCGGGGTGGAGCAGTTcGGTAGCTCGTCGGGCTCATAACCCGAAGGtCGCAGGTTCAAATCCTGCCCCCGCAACCA
Str: .>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<.....
                    
chr.trna43 (951288-951364)	Length: 77 bp
Type: Met	Anticodon: CAT at 35-37 (951322-951324)	Score: 90.17
Seq: CGCGGGGTGGAGCAGTTcGGTAGCTCGTCGGGCTCATAACCCGAAGGtCGCAGGTTCAAATCCTGCCCCCGCAACCA
Str: .>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<.....
                    
chr.trna76 (3171723-3171647)	Length: 77 bp
Type: Met	Anticodon: CAT at 35-37 (3171689-3171687)	Score: 90.17
Seq: CGCGGGGTGGAGCAGTTcGGTAGCTCGTCGGGCTCATAACCCGAAGGtCGCAGGTTCAAATCCTGCCCCCGCAACCA
Str: .>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<.....
                    
chr.trna74 (3171915-3171839)	Length: 77 bp
Type: Met	Anticodon: CAT at 35-37 (3171881-3171879)	Score: 97.54
Seq: GGACCTTTAGCTCAGTTGGTtAGAGCAGACGGCTCATAACCGTCCGGtCGTAGGTTCGAGTCCTACAAGGTCCACCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
                    
chr.trna61 (4153882-4153810)	Length: 73 bp
Type: Phe	Anticodon: GAA at 34-36 (4153849-4153847)	Score: 89.60
Seq: GGCTCGGTAGCTCAGTTGGTAGAGCAACGGACTGAAAATCCGTGTGtCGGCGGTTCGATTCCGTCCCGAGCCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<.
                    
chr.trna45 (951465-951540)	Length: 76 bp
Type: Phe	Anticodon: GAA at 34-36 (951498-951500)	Score: 91.60
Seq: GGCTCGGTAGCTCAGTTGGTAAAGCAACGGACTGAAAATCCGTGTGtCGGCGGTTCGATTCCGTCCCGAGCCACCA
Str: >>>>>>>..>>>..........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
                    
chr.trna78 (3171546-3171471)	Length: 76 bp
Type: Phe	Anticodon: GAA at 34-36 (3171513-3171511)	Score: 97.89
Seq: GGCTCGGTAGCTCAGTTGGTAGAGCAACGGACTGAAAATCCGTGTGtCGGCGGTTCGATTCCGTCCCGAGCCACCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
                    
chr.trna15 (96057-96133)	Length: 77 bp
Type: Pro	Anticodon: TGG at 35-37 (96091-96093)	Score: 94.72
Seq: CGGGAAGTAGCTCAGCTtGGTAGAGCACATGGTTTGGGACCATGGGGtCGCAGGTTCGAATCCTGTCTTCCCGACCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
                    
chr.trna21 (166167-166243)	Length: 77 bp
Type: Pro	Anticodon: TGG at 35-37 (166201-166203)	Score: 94.72
Seq: CGGGAAGTAGCTCAGCTtGGTAGAGCACATGGTTTGGGACCATGGGGtCGCAGGTTCGAATCCTGTCTTCCCGACCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
                    
chr.trna71 (3172169-3172093)	Length: 77 bp
Type: Pro	Anticodon: TGG at 35-37 (3172135-3172133)	Score: 94.72
Seq: CGGGAAGTAGCTCAGCTtGGTAGAGCACATGGTTTGGGACCATGGGGtCGCAGGTTCGAATCCTGTCTTCCCGACCA
Str: >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
                    
chr.trna29 (528344-528434)	Length: 91 bp
Type: Ser	Anticodon: GCT at 35-37 (528378-528380)	Score: 71.43
Seq: GGAGAAGTACTCAAGTGGCtgAAGAGGCGCCCCTGCTAAGGGTGTAGGTCGCGTAAGCGGCGCGAGGGTTCAAATCCCTCCTTCTCCGCCA
Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<...>>>>>....<<<<<..>>>>>.......<<<<<<<<<<<<....
                    
chr.trna83 (3171113-3171023)	Length: 91 bp
Type: Ser	Anticodon: GCT at 35-37 (3171079-3171077)	Score: 72.43
Seq: GGAGAAGTACTCAAGTGGCtgAAGAGGCGCCCCTGCTAAGGGTGTAGGTCGTGTAAGCGGCGCGAGGGTTCAAATCCCTCCTTCTCCGCCA
Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<...>>>>>....<<<<<..>>>>>.......<<<<<<<<<<<<....
                    
chr.trna40 (950996-951087)	Length: 92 bp
Type: Ser	Anticodon: GGA at 35-37 (951030-951032)	Score: 64.16
Seq: GGAGAGCTGTCCGAGTGGTcgAAGGAGCACGATTGGAAATCGTGTAGGCGGTCAAcTCCGTCTCAAGGGTTCGAATCCCTTGCTCTCCGCCA
Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.>>>>>>......<<<<<<.>>>>>.......<<<<<<<<<<<<....
                    
chr.trna3 (22290-22382)	Length: 93 bp
Type: Ser	Anticodon: TGA at 37-39 (22326-22328)	Score: 71.03
Seq: GGAGGAATACCCAAGTCcGGCtgAAGGGATCGGTCTTGAAAACCGACAGGGGTGTCAAAGCCCGCGGGGGTTCGAATCCCTCTTCCTCCGCCA
Str: >>>>>>>..>>>.............<<<.>>>>>.......<<<<<...>>>>......<<<<..>>>>>.......<<<<<<<<<<<<....
                    
chr.trna75 (3171832-3171741)	Length: 92 bp
Type: Ser	Anticodon: TGA at 37-39 (3171796-3171794)	Score: 74.88
Seq: GGAGGAATACCCAAGTCtGGCtgAAGGGATCGGTCTTGAAAACCGACAGGGTGTCAAAGCCCGCGGGGGTTCGAATCCCTCTTCCTCCGCCA
Str: >>>>>>>..>>>.............<<<.>>>>>.......<<<<<..>>>>......<<<<..>>>>>.......<<<<<<<<<<<<....
                    
chr.trna18 (165829-165901)	Length: 73 bp
Type: Thr	Anticodon: GGT at 34-36 (165862-165864)	Score: 75.20
Seq: GCTTCCATAGCTCAGCAGGTAGAGCACTTCCATGGTAAGGAAGAGGtCAGCGGTTCGAGCCCGCTTGGAAGCT
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<.
                    
chr.trna46 (951546-951618)	Length: 73 bp
Type: Thr	Anticodon: TGT at 34-36 (951579-951581)	Score: 76.44
Seq: GCCGGTGTAGCTCAATTGGTAAAGCAACTGACTTGTAATCAGTAGGtTGGGGGTTCAAGTCCTCTTGCCGGCA
Str: >>>>>>>..>>>..........<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<.
                    
chr.trna25 (194352-194424)	Length: 73 bp
Type: Thr	Anticodon: TGT at 34-36 (194385-194387)	Score: 82.73
Seq: GCCGGTGTAGCTCAATTGGTAGAGCAACTGACTTGTAATCAGTAGGtTGGGGGTTCAAGTCCTCTTGCCGGCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<.
                    
chr.trna65 (3172736-3172661)	Length: 76 bp
Type: Thr	Anticodon: TGT at 34-36 (3172703-3172701)	Score: 91.03
Seq: GCCGGTGTAGCTCAATTGGTAGAGCAACTGACTTGTAATCAGTAGGtTGGGGGTTCAAGTCCTCTTGCCGGCACCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
                    
chr.trna9 (95452-95527)	Length: 76 bp
Type: Thr	Anticodon: TGT at 34-36 (95485-95487)	Score: 91.03
Seq: GCCGGTGTAGCTCAATTGGTAGAGCAACTGACTTGTAATCAGTAGGtTGGGGGTTCAAGTCCTCTTGCCGGCACCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
                    
chr.trna48 (951731-951804)	Length: 74 bp
Type: Trp	Anticodon: CCA at 33-35 (951763-951765)	Score: 65.41
Seq: AGGGGCATAGTGTAACGGTAGAACAGAGGTCTCCAAAACCTCCGGTGTGGGTTCGATTCCTACTGCCCCTGCCA
Str: >>>>>>>..>>.>.......<.<<.>>>>>.......<<<<<....>>>>>.......<<<<<<<<<<<<....
                    
chr.trna26 (194447-194531)	Length: 85 bp
Type: Tyr	Anticodon: GTA at 35-37 (194481-194483)	Score: 78.86
Seq: GGAGGGGTAGCGAAGTGGCtaAACGCGGCGGACTGTAAATCCGCTCCCTCAGGGTtCGGCAGTTCGAATCTGCCCCCCTCCACCA
Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.>>>...<<<...>>>>>.......<<<<<<<<<<<<....
                    
chr.trna47 (951641-951725)	Length: 85 bp
Type: Tyr	Anticodon: GTA at 35-37 (951675-951677)	Score: 78.86
Seq: GGAGGGGTAGCGAAGTGGCtaAACGCGGCGGACTGTAAATCCGCTCCCTCAGGGTtCGGCAGTTCGAATCTGCCCCCCTCCACCA
Str: >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.>>>...<<<...>>>>>.......<<<<<<<<<<<<....
                    
chr.trna56 (1262101-1262173)	Length: 73 bp
Type: Val	Anticodon: GAC at 34-36 (1262134-1262136)	Score: 71.64
Seq: GATTCCGTAGCTCAGCTGGGAGAGCGCTACCTTGACAGGGTAGAGGtCGCTGGTTCGAGCCCAGTCGGAATCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<.
                    
chr.trna42 (951203-951278)	Length: 76 bp
Type: Val	Anticodon: TAC at 34-36 (951236-951238)	Score: 90.98
Seq: GGAGGATTAGCTCAGCTGGGAGAGCATTTGCCTTACAAGCAGAGGGtCGGCGGTTCGAGCCCGTCATCCTCCACCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
                    
chr.trna24 (194272-194347)	Length: 76 bp
Type: Val	Anticodon: TAC at 34-36 (194305-194307)	Score: 96.46
Seq: GGAGGATTAGCTCAGCTGGGAGAGCATCTGCCTTACAAGCAGAGGGtCGGCGGTTCGAGCCCGTCATCCTCCACCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
                    
chr.trna64 (3172844-3172769)	Length: 76 bp
Type: Val	Anticodon: TAC at 34-36 (3172811-3172809)	Score: 96.46
Seq: GGAGGATTAGCTCAGCTGGGAGAGCATCTGCCTTACAAGCAGAGGGtCGGCGGTTCGAGCCCGTCATCCTCCACCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
                    
chr.trna8 (95372-95447)	Length: 76 bp
Type: Val	Anticodon: TAC at 34-36 (95405-95407)	Score: 96.46
Seq: GGAGGATTAGCTCAGCTGGGAGAGCATCTGCCTTACAAGCAGAGGGtCGGCGGTTCGAGCCCGTCATCCTCCACCA
Str: >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<.....>>>>>.......<<<<<<<<<<<<....
         



The Genomic tRNA Database is curated by Todd Lowe and Patricia Chan. Please email lowe@soe.ucsc.edu with any questions and comments. To submit corrections, please use our Bug and Request Tracking System.