GtRNAdb

tRNAscan-SE Analysis of Bacillus thuringiensis Al Hakam

>> Main Overview
>> tRNAs by Isotype
>> tRNAs by Locus
>> Secondary Structures
>> tRNA Alignments
>> FASTA Seqs
>> Run Options/Stats
>> Analysis Notes
>> UCSC Genome Browser
>> Genome DB
>> Genome Seq
Structurally Aligned tRNAs (by Isotype & Anticodon)

Structural alignments are generated by aligning tRNA sequences against domain-specific tRNA covariance models with the use of COVE.


[Ala] [Arg] [Asn] [Asp] [Cys] [Gln] [Glu] [Gly] [His] [Ile] [Leu] [Lys] [Met] [Phe] [Pro] [Ser] [Thr] [Trp] [Tyr] [Val]
[Suppressor] [Selenocysteine]


Ala tRNAs

>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>........<<<<<<<<<<<<.... GGGGCCTTAGCTCAGCTGGGAGAGCGCCTGCCTTGCACGCAGGAG...........GtCAGCGGTTCG.ATCCCGCTAGGCTCCACCA chr.trna5-AlaTGC Sc: 93.92 GGGGCCTTAGCTCAGCTGGGAGAGCGCCTGCCTTGCACGCAGGAG...........GtCAGCGGTTCG.ATCCCGCTAGGCTCCACCA chr.trna2-AlaTGC Sc: 93.92 GGGGCCTTAGCTCAGCTGGGAGAGCGCCTGCCTTGCACGCAGGAG...........GtCAGCGGTTCG.ATCCCGCTAGGCTCCACCA chr.trna16-AlaTGC Sc: 93.92 GGGGCCTTAGCTCAGCTGGGAGAGCGCCTGCCTTGCACGCAGGAG...........GtCAGCGGTTCG.ATCCCGCTAGGCTCCA... chr.trna64-AlaTGC Sc: 85.62 GGGGCCTTAGCTCAGCTGGGAGAGCGCCTGCCTTGCACGCAGGAG...........GtCAGCGGTTCG.ATCCCGCTAGGCTCCA... chr.trna25-AlaTGC Sc: 85.62 GGGGCCTTAGCTCAGCTGGGAGAGCGCCTGCCTTGCACGCAGGAG...........GtCAGCGGTTCGcATCCCGCTAGGCTCCA... chr.trna88-AlaTGC Sc: 76.07

Arg tRNAs

>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<...................>>>>>.......<<<<<.<<<<<<<.... GCGCCCGTAGCTCAATTGGAtAGAGCGTTTGACTACGGATCAAGAG..............GtTAGGGGTTCGACTCCTCT.CGGGCGCGCCA chr.trna34-ArgACG Sc: 78.27 GCGCCCGTAGCTCAATTGGAtAGAGCGTTTGACTACGGATCAAGAG..............GtTAGGGGTTCGACTCCTCT.CGGGCGCG... chr.trna86-ArgACG Sc: 69.97 GCGCCCGTAGCTCAATTGGAtAGAGCGTTTGACTACGGATCAAGAG..............GtTAGGGGTTCGACTCCTCT.CGGGCGCG... chr.trna62-ArgACG Sc: 69.97 GCGCCCGTAGCTCAATTGGAtAGAGCGTTTGACTACGGATCAAGAG..............GtTAGGGGTTCGACTCCTCT.CGGGCGCG... chr.trna14-ArgACG Sc: 69.97 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<...................>>>>>.......<<<<<.<<<<<<<.... GCGCCCATAGCTCAGTCGGAtAGAGCGGTGGTTTCCGGTACCACG.TCT...........GcCGGGGGTTCGAATCCCTC.TGGGCGCG... chr.trna79-ArgCCG Sc: 62.08

Asn tRNAs

>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... TCCGCAGTAGCTCAGTGGTA.GAGCTATCGGCTGTTAACCGATCG...........GtCGTAGGTTCGAGTCCTACCTGCGGAGCCA chr.trna99-AsnGTT Sc: 88.32 TCCGCAGTAGCTCAGTGGTA.GAGCTATCGGCTGTTAACCGATCG...........GtCGTAGGTTCGAGTCCTACCTGCGGAGCCA chr.trna73-AsnGTT Sc: 88.32 TCCGCAGTAGCTCAGTGGTA.GAGCTATCGGCTGTTAACCGATCG...........GtCGTAGGTTCGAGTCCTACCTGCGGAGCCA chr.trna26-AsnGTT Sc: 88.32 TCCGCAGTAGCTCAGTGGTA.GAGCTATCGGCTGTTAACCGATCG...........GtCGTAGGTTCGAGTCCTACCTGCGGAGCCA chr.trna17-AsnGTT Sc: 88.32 TCCGCAGTAGCTCAGCGGTA.GAGCTATCGGCTGTTAACCGATCG...........GtCGTAGGTTCGATTCCTACCTGCGGAGCCA chr.trna39-AsnGTT Sc: 86.53

Asp tRNAs

>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGTCCCGTGGTGTAGTGGTtA.ACATGCCTGCCTGTCACGCAGGAG...........AtCGCCGGTTCGACCCCGGTCGGGACCGCCA chr.trna93-AspGTC Sc: 76.06 GGTCCCGTGGTGTAGTGGTtA.ACATGCCTGCCTGTCACGCAGGAG...........AtCGCCGGTTCGACCCCGGTCGGGACCGCCA chr.trna77-AspGTC Sc: 76.06 GGTCCCGTGGTGTAGTGGTtA.ACATGCCTGCCTGTCACGCAGGAG...........AtCGCCGGTTCGACCCCGGTCGGGACCGCCA chr.trna68-AspGTC Sc: 76.06 GGTCCCGTGGTGTAGTGGTtA.ACATGCCTGCCTGTCACGCAGGAG...........AtCGCCGGTTCGACCCCGGTCGGGACCGCCA chr.trna44-AspGTC Sc: 76.06 GGTCCCGTGGTGTAGTGGTtA.ACATGCCTGCCTGTCACGCAGGAG...........AtCGCCGGTTCGACCCCGGTCGGGACCGCCA chr.trna38-AspGTC Sc: 76.06 GGTCCCGTGGTGTAGTGGTtA.ACATGCCTGCCTGTCACGCAGGAG...........AtCGCCGGTTCGACCCCGGTCGGGACCGCCA chr.trna30-AspGTC Sc: 76.06

Cys tRNAs

>>>>>>>..>>>..........<<<.>>>>>.......<<<<<...............>>>>>.......<<<<<.<<<<<<<.... GGCGGCATAGCCAAGTGGTA.AGGCAGAGGTCTGCAAAACCTTT...........AtCACCGGTTCAAATCCGGT.TGCCGCCT... chr.trna52-CysGCA Sc: 71.27

Gln tRNAs

>>>>>>>..>>>..........<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... TGGGCTATAGCCAAGCGGTA.AGGCAACGGACTTTGACTCCGTCA...........TgCGCTGGTTCGAATCCAGCTAGCCCAGCCA chr.trna57-GlnTTG Sc: 78.60 TGGGCTATAGCCAAGCGGTA.AGGCAACGGACTTTGACTCCGTCA...........TgCGCTGGTTCGAATCCAGCTAGCCCAGCCA chr.trna50-GlnTTG Sc: 78.60 TGGGCTATAGCCAAGCGGTA.AGGCAACGGACTTTGACTCCGTCA...........TgCGCTGGTTCGAATCCAGCTAGCCCAGCCA chr.trna31-GlnTTG Sc: 78.60 TGGGCTATAGCCAAGCGGTA.AGGCAACGGACTTTGACTCCGTCA...........TgCGCTGGTTCGAATCCAGCTAGCCCAGCCA chr.trna22-GlnTTG Sc: 78.60

Glu tRNAs

>>>>>>>..>>>...........<<<.>>>>>.......<<<<<...............>>>>>.......<<<<<<<<<<<<.... GGCCCGTTGGTCAAGTGGTtA.AGACACCGCCCTTTCACGGCGGTA...........ACACGGGTTCGAATCCCGTACGGGTCACCA chr.trna41-GluTTC Sc: 79.30 GGCCCGTTGGTCAAGTGGTtA.AGACACCGCCCTTTCACGGCGGTA...........ACACGGGTTCGAATCCCGTACGGGTCACCA chr.trna28-GluTTC Sc: 79.30 GGCCCGTTGGTCAAGTGGTtA.AGACACCGCCCTTTCACGGCGGTA...........ACACGGGTTCGAATCCCGTACGGGTCACCA chr.trna19-GluTTC Sc: 79.30 GGCCCGTTGGTCAAGTGGTtA.AGACACCGCCCTTTCACGGCGGTA...........ACACGGGTTCGAATCCCGTACGGGTCA... chr.trna76-GluTTC Sc: 71.01 GGCCCGTTGGTCAAGTGGTtA.AGACACCGCCCTTTCACGGCGGTA...........ACACGGGTTCGAATCCCGTACGGGTCA... chr.trna74-GluTTC Sc: 71.01 GGCCCGTTGGTCAAGTGGTtA.AGACACCGCCCTTTCACGGCGGTA...........ACACGGGTTCGAATCCCGTACGGGTCA... chr.trna7-GluTTC Sc: 71.01 GGCCCGTTGGTCAAGTGGTtA.AGACACCGCCCTTTCACGGCGGTA...........ACACGGGTTCGAATCCCGTACGGGTCA... chr.trna101-GluTTC Sc: 71.01

Gly tRNAs

>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<.<<<<<<<.... GCGGAAGTAGTTCAGTGGTA.GAATACAACCTTGCCAAGGTTGGG...........GtCGCGGGTTCGAATCCCGT.CTTCCGCTCCA chr.trna84-GlyGCC Sc: 88.86 GCGGAAGTAGTTCAGTGGTA.GAATACAACCTTGCCAAGGTTGGG...........GtCGCGGGTTCGAATCCCGT.CTTCCGCTCCA chr.trna60-GlyGCC Sc: 88.86 GCGGAAGTAGTTCAGTGGTA.GAATACAACCTTGCCAAGGTTGGG...........GtCGCGGGTTCGAATCCCGT.CTTCCGCTCCA chr.trna51-GlyGCC Sc: 88.86 GCGGAAGTAGTTCAGTGGTA.GAATACAACCTTGCCAAGGTTGGG...........GtCGCGGGTTCGAATCCCGT.CTTCCGCTCCA chr.trna12-GlyGCC Sc: 88.86 GCGGAAGTAGTTCAGTGGTA.GAATACAACCTTGCCAAGGTTGGG...........GtCGCGGGTTCGAATCCCGT.CTTCCGCT... chr.trna24-GlyGCC Sc: 80.56 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<.<<<<<<<.... GCGGGTGTAGTTTAGTGGTA.AAACAAGAGCCTTCCAAGCTCTG............GtCGAGAGTTCGATTCTCTT.CACCCGCTCCA chr.trna54-GlyTCC Sc: 80.08 GCGGGTGTAGTTTAGTGGTA.AAACAAGAGCCTTCCAAGCTCTG............GtCGAGAGTTCGATTCTCTT.CACCCGCTCCA chr.trna102-GlyTCC Sc: 80.08 GCGGGTGTAGTTTAGTGGTA.AAACAAGAGCCTTCCAAGCTCTG............GtCGAGAGTTCGATTCTCTT.CACCCGCT... chr.trna97-GlyTCC Sc: 71.78 GCGGGTGTAGTTTAGTGGTA.AAACAAGAGCCTTCCAAGCTCTG............GtCGAGAGTTCGATTCTCTT.CACCCGCT... chr.trna36-GlyTCC Sc: 71.78

His tRNAs

>>>>>>>..>>>...........<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCGGTTGTGGCGAAGTGGTtA.ACGCACCGGATTGTGGCTCCGGCA...........TtCGTGGGTTCGATTCCCATCAGTCGCCCCA chr.trna82-HisGTG Sc: 74.61 GCGGTTGTGGCGAAGTGGTtA.ACGCACCGGATTGTGGCTCCGGCA...........TtCGTGGGTTCGATTCCCATCAGTCGCCCCA chr.trna49-HisGTG Sc: 74.61

Ile tRNAs

>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGCCTATAGCTCAGCTGGTtAGAGCGCACGCCTGATAAGCGTGAG...........GtCGATGGTTCGAGTCCATTTAGGCCCACCA chr.trna98-IleGAT Sc: 101.21 GGGCCTATAGCTCAGCTGGTtAGAGCGCACGCCTGATAAGCGTGAG...........GtCGATGGTTCGAGTCCATTTAGGCCCACCA chr.trna72-IleGAT Sc: 101.21 GGGCCTATAGCTCAGCTGGTtAGAGCGCACGCCTGATAAGCGTGAG...........GtCGATGGTTCGAGTCCATTTAGGCCCACCA chr.trna4-IleGAT Sc: 101.21 GGGCCTATAGCTCAGCTGGTtAGAGCGCACGCCTGATAAGCGTGAG...........GtCGATGGTTCGAGTCCATTTAGGCCCACCA chr.trna1-IleGAT Sc: 101.21

Leu tRNAs

>>>>>>>..>>>............<<<.>>>>>.......<<<<<.>>>>...........<<<<..>>>>>.......<<<<<.<<<<<<<.... GCGGTCGTGGCGGAAC.GGCaG.ACGCGCTAGGTTGAGGGCCTAGTGGGG.GAAA......CCCCGTGGAGGTTCAAGTCCTCT.CGGCCGCATCA chr.trna33-LeuGAG Sc: 57.19 >>>>>>>..>>>............<<<.>>>>>.......<<<<<.>>>.............<<<..>>>>>.......<<<<<.<<<<<<<.... GCGGGTGTGGCGGAATTGGCaG.ACGCACCAGACTTAGGATCTGGCGCC..TTT........GGCGTGGGGGTTCGACTCCCTT.CACCCGCA... chr.trna83-LeuTAG Sc: 67.96 GCGGGTGTGGCGGAATTGGCaG.ACGCACTAGACTTAGGATCTAGCGCC..TTT........GGCGTGGGGGTTCGACTCCCTT.CACCCGCA... chr.trna59-LeuTAG Sc: 66.65 GCGGGTGTGGCGGAATTGGCaG.ACGCACTAGACTTAGGATCTAGCGCC..TTT........GGCGTGGGGGTTCGACTCCCTT.CACCCGCA... chr.trna11-LeuTAG Sc: 66.65 >>>>>>>..>>>............<<<.>>>>>.......<<<<<.>>>>...........<<<<..>>>>>.......<<<<<.<<<<<<<.... GCCGATGTGGCGGAATTGGCaG.ACGCGCACGACTCAAAATCGTGTTCCTT.........CGGGAGTGTCGGTTCGACCCCGAC.CATCGGTATCA chr.trna53-LeuCAA Sc: 60.08 >>>>>>>..>>>............<<<.>>>>>.......<<<<<.>>>>>.........<<<<<..>>>>>.......<<<<<.<<<<<<<.... GCCGGGGTGGCGGAACAGGCaG.ACGCACAGGACTTAAAATCCTGCGGTGGGTGA.....CCACCGTGCGGGTTCGACCCCCGC.CCTCGGCACCA chr.trna85-LeuTAA Sc: 71.28 GCCGGGGTGGCGGAACAGGCaG.ACGCACAGGACTTAAAATCCTGCGGTGGGTGA.....CCACCGTGCGGGTTCGACCCCCGC.CCTCGGCACCA chr.trna61-LeuTAA Sc: 71.28 GCCGGGGTGGCGGAACAGGCaG.ACGCACAGGACTTAAAATCCTGCGGTGGGTGA.....CCACCGTGCGGGTTCGACCCCCGC.CCTCGGCACCA chr.trna13-LeuTAA Sc: 71.28

Lys tRNAs

>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GAGCCATTAGCTCAGTTGGTAGAGCATCTGACTTTTAATCAGAGG...........GtCGAAGGTTCGAGTCCTTCATGGCTCACCA chr.trna96-LysTTT Sc: 98.67 GAGCCATTAGCTCAGTTGGTAGAGCATCTGACTTTTAATCAGAGG...........GtCGAAGGTTCGAGTCCTTCATGGCTCACCA chr.trna75-LysTTT Sc: 98.67 GAGCCATTAGCTCAGTTGGTAGAGCATCTGACTTTTAATCAGAGG...........GtCGAAGGTTCGAGTCCTTCATGGCTCACCA chr.trna58-LysTTT Sc: 98.67 GAGCCATTAGCTCAGTTGGTAGAGCATCTGACTTTTAATCAGAGG...........GtCGAAGGTTCGAGTCCTTCATGGCTCACCA chr.trna23-LysTTT Sc: 98.67 GAGCCATTAGCTCAGTTGGTAGAGCATCTGACTTTTAATCAGAGG...........GtCGAAGGTTCGAGTCCTTCATGGCTCACCA chr.trna10-LysTTT Sc: 98.67 GAGCCATTAGCTCAGTTGGTAGAGCATCTGACTTTTAATCAGAGG...........GtCGAAGGTTCGAGTCCTTCATGGCTCA... chr.trna32-LysTTT Sc: 90.38

Met tRNAs

>>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGACCTTTAGCTCAGCT.GGTtAGAGCAGACGGCTCATAACCGTCCG...........GtCGTAGGTTCGAGTCCTACAAGGTCCACCA chr.trna90-MetCAT Sc: 96.69 .>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<..... CGCGGGGTGGAGCAGTCtGGT.AGCTCGTCGGGCTCATAACCCGAAG...........GtCGCAGGTTCAAATCCTGTCCCCGCAACCA chr.trna92-MetCAT Sc: 89.08 >>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGACCCTTAGCTCAGCT.GGTtAGAGCAGACGGCTCATAACCGTCCG...........GtCGTAGGTTCGAGTCCTACAGGGTCCA... chr.trna103-MetCAT Sc: 88.27 .>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<..... CGCGGGGTGGAGCAGCAcGGT.AGCTCGTCGGGCTCATAACCCGAAG...........GtCGCAGGTTCAAATCCTGTCCCCGCAACCA chr.trna67-MetCAT Sc: 85.35 CGCGGGGTGGAGCAGCAcGGT.AGCTCGTCGGGCTCATAACCCGAAG...........GtCGCAGGTTCAAATCCTGTCCCCGCAACCA chr.trna43-MetCAT Sc: 85.35 CGCGGGGTGGAGCAGCAcGGT.AGCTCGTCGGGCTCATAACCCGAAG...........GtCGCAGGTTCAAATCCTGTCCCCGCAACCA chr.trna37-MetCAT Sc: 85.35 >>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGCGGTGTAGCTCAGCT.GGCtAGAGCGTACGGTTCATACCCGTGAG...........GtCGGGGGTTCGATCCCCTCCGCCGCTACCA chr.trna89-MetCAT Sc: 83.99 GGCGGTGTAGCTCAGCT.GGCtAGAGCGTACGGTTCATACCCGTGAG...........GtCGGGGGTTCGATCCCCTCCGCCGCTA... chr.trna6-MetCAT Sc: 75.69

Phe tRNAs

>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGCTCGGTAGCTCAGTCGGTAGAGCAGAGGACTGAAAATCCTCGT...........GtCGGCGGTTCGATTCCGTCCCGAGCCACCA chr.trna94-PheGAA Sc: 92.86 GGCTCGGTAGCTCAGTCGGTAGAGCAGAGGACTGAAAATCCTCGT...........GtCGGCGGTTCGATTCCGTCCCGAGCCACCA chr.trna69-PheGAA Sc: 92.86 GGCTCGGTAGCTCAGTCGGTAGAGCAGAGGACTGAAAATCCTCGT...........GtCGGCGGTTCGATTCCGTCCCGAGCCACCA chr.trna45-PheGAA Sc: 92.86 GGCTCGGTAGCTCAGTCGGTAGAGCAGAGGACTGAAAATCCTCGT...........GtCGGCGGTTCGATTCCGTCCCGAGCCA... chr.trna78-PheGAA Sc: 84.57

Pro tRNAs

>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... CGGGAAGTGGCTCAGCTtGGTAGAGCACCTGGTTTGGGACCAGGGG...........GtCGCAGGTTCAAATCCTGTCTTCCCGACCA chr.trna35-ProTGG Sc: 93.98 CGGGAAGTGGCTCAGCTtGGTAGAGCACCTGGTTTGGGACCAGGGG...........GtCGCAGGTTCAAATCCTGTCTTCCCGA... chr.trna87-ProTGG Sc: 85.68 CGGGAAGTGGCTCAGCTtGGTAGAGCACCTGGTTTGGGACCAGGGG...........GtCGCAGGTTCAAATCCTGTCTTCCCGA... chr.trna63-ProTGG Sc: 85.68 CGGGAAGTGGCTCAGCTtGGTAGAGCACCTGGTTTGGGACCAGGGG...........GtCGCAGGTTCAAATCCTGTCTTCCCGA... chr.trna15-ProTGG Sc: 85.68

SeC tRNAs

Ser tRNAs

>>>>>>>..>>>..............<<<.>>>>>.......<<<<<..>>>>>>......<<<<<<.>>>>>.......<<<<<..<<<<<<<.... GGAGAGCTGTCCGAGTT.GGCcgA.AGGAGCACGATTGGAAATCGTGT.ATACGTCACAA.GCGTATCAAGGGTTCGAATCCCTT..GCTCTCCGCCA chr.trna40-SerGGA Sc: 63.66 >>>>>>>..>>>..............<<<.>>>>>.......<<<<<...>>>>>......<<<<<..>>>>>.......<<<<<..<<<<<<<.... GGAGGTATACCCAAGTCtGGCtgA.AGGGATCGGTCTTGAAAACCGACAGGCGGT.GAGA.GTCGCGCGGGGGTTCGAATCCCTC..TACCTCCTCCA chr.trna3-SerTGA Sc: 72.57 GGAGGTATACCCAAGTTcGGCtgA.AGGGATCGGTCTTGAAAACCGACAGGCGGC.GAGA.GTCGCGCGGGGGTTCGAATCCCTC..TACCTCCTCCA chr.trna91-SerTGA Sc: 72.21 GGAGGTATACCCAAGTTcGGCtgA.AGGGATCGGTCTTGAAAACCGACAGGCGGC.GAGA.GTCGCGCGGGGGTTCGAATCCCTC..TACCTCCTCCA chr.trna66-SerTGA Sc: 72.21 GGAGGTATACCCAAGTTcGGCtgA.AGGGATCGGTCTTGAAAACCGACAGGCGGT.GAGA.ATCGCGCGGGGGTTCGAATCCCTC..TACCTCCTCCA chr.trna65-SerTGA Sc: 71.21 >>>>>>>..>>>..............<<<.>>>>>.......<<<<<...>>>>>......<<<<<..>>>>>.......<<<<<..<<<<<<<.... AGAGAAGTACCCAAGT..GGCtcA.AGGGGCTCCCCTGCTAAGGGAGTAGATCGC.GAAC.GCGGTGCGAGGGTTCGAATCCCTT..CTTCTCTGCCA chr.trna27-SerGCT Sc: 67.93 AGAGAAGTACCCAAGT..GGCtcA.AGGGGCTCCCCTGCTAAGGGAGTAGATCGC.GAAC.GCGGTGCGAGGGTTCGAATCCCTT..CTTCTCTGCCA chr.trna100-SerGCT Sc: 67.93

Sup tRNAs

Thr tRNAs

>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCTTCCATAGCTCAGCTGGTAGAGCACTTCCATGGTAAGGAAGAG...........GtCACCGGTTCAAGCCCGGTTGGAAGCT... chr.trna18-ThrGGT Sc: 78.48 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCCGGCTTAGCTCAATTGGTAGAGCAACTGACTTGTAATCAGTAG...........GtTGGGGGTTCAAGTCCTCTAGCCGGCACCA chr.trna95-ThrTGT Sc: 96.17 GCCGGCTTAGCTCAATTGGTAGAGCAACTGACTTGTAATCAGTAG...........GtTGGGGGTTCAAGTCCTCTAGCCGGCACCA chr.trna46-ThrTGT Sc: 96.17 GCCGACTTAGCTCAATTGGTAGAGCAACTGACTTGTAATCAGTAG...........GtTGGGGGTTCAAGTCCTCTAGTCGGCACCA chr.trna9-ThrTGT Sc: 95.44 GCCGACTTAGCTCAATTGGTAGAGCAACTGACTTGTAATCAGTAG...........GtTGGGGGTTCAAGTCCTCTAGTCGGCACCA chr.trna81-ThrTGT Sc: 95.44 GCCGACTTAGCTCAATTGGTAGAGCAACTGACTTGTAATCAGTAG...........GtTGGGGGTTCAAGTCCTCTAGTCGGCA... chr.trna70-ThrTGT Sc: 87.15

Trp tRNAs

>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<...............>>>>>.......<<<<<<<<<<<<.... AGGGGCATAGTTTAAAGGTA.GAACTGAGGTCTCCAAAACCTCCA...........GTGTGGGTTCGATTCCTACTGCCCCTGCCA chr.trna48-TrpCCA Sc: 61.92 AGGGGCATAGTTTAAAGGTA.GAACTGAGGTCTCCAAAACCTCCA...........GTGTGGGTTCGATTCCTACTGCCCCTG... chr.trna71-TrpCCA Sc: 53.62

Tyr tRNAs

>>>>>>>..>>>............<<<.>>>>>.......<<<<<.>>>.........<<<...>>>>>.......<<<<<.<<<<<<<.... GGAGGGGTAGCGAAGTGGCtaA.ACGCGGCGGACTGTAAATCCGCTCCTT.......CGGGTtCGGCAGTTCGAATCTGCC.CCCCTCCACCA chr.trna56-TyrGTA Sc: 77.59 GGAGGGGTAGCGAAGTGGCtaA.ACGCGGCGGACTGTAAATCCGCTCCTT.......CGGGTtCGGCAGTTCGAATCTGCC.CCCCTCCACCA chr.trna47-TyrGTA Sc: 77.59 GGAGGGGTAGCGAAGTGGCtaA.ACGCGGCGGACTGTAAATCCGCTCCTT.......CGGGTtCGGCAGTTCGAATCTGCC.CCCCTCCACCA chr.trna21-TyrGTA Sc: 77.59

Val tRNAs

>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>.>>>.......<<<.<<<<<<<<.... GATCCCGTAGCTCAGCAGGGAGAGCGCCACCTTGACAGGGTGGAG...........GtCGTGAGTTCGAGCCTCTCCGGGGTCA... chr.trna104-ValGAC Sc: 61.20 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGAGGATTAGCTCAGCTGGGAGAGCACCTGCCTTACAAGCAGGGG...........GtCGGCGGTTCGATCCCGTCATCCTCCACCA chr.trna80-ValTAC Sc: 97.03 GGAGGATTAGCTCAGCTGGGAGAGCACCTGCCTTACAAGCAGGGG...........GtCGGCGGTTCGATCCCGTCATCCTCCACCA chr.trna8-ValTAC Sc: 97.03 GGAGGATTAGCTCAGCTGGGAGAGCACCTGCCTTACAAGCAGGGG...........GtCGGCGGTTCGATCCCGTCATCCTCCACCA chr.trna55-ValTAC Sc: 97.03 GGAGGATTAGCTCAGCTGGGAGAGCACCTGCCTTACAAGCAGGGG...........GtCGGCGGTTCGATCCCGTCATCCTCCACCA chr.trna42-ValTAC Sc: 97.03 GGAGGATTAGCTCAGCTGGGAGAGCACCTGCCTTACAAGCAGGGG...........GtCGGCGGTTCGATCCCGTCATCCTCCACCA chr.trna29-ValTAC Sc: 97.03 GGAGGATTAGCTCAGCTGGGAGAGCACCTGCCTTACAAGCAGGGG...........GtCGGCGGTTCGATCCCGTCATCCTCCACCA chr.trna20-ValTAC Sc: 97.03

The Genomic tRNA Database is curated by Todd Lowe and Patricia Chan. Please email lowe@soe.ucsc.edu with any questions and comments. To submit corrections, please use our Bug and Request Tracking System.