GtRNAdb

tRNAscan-SE Analysis of Candida glabrata CBS138

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tRNA Gene Summary





tRNAs Decoding Standard 20 AA221
Selenocysteine tRNAs (TCA)1
Possible suppressor tRNAs (CTA,TTA)0
tRNAs with undetermined
or unknown isotypes
0
Predicted pseudogenes5
Total tRNAs227


Intron Summary

tRNAs with introns
45
Pro
TGG
7
Ser
CGA
1
Ser
GCT
3
Leu
TAG
4
Leu
CAA
8
Phe
GAA
6
Lys
TTT
3
Ile
TAT
2
Tyr
GTA
6
Trp
CCA
5


Four Box tRNA Sets

IsotypetRNA Count by AnticodonTotal
AlaAGC
10
GGC
 
CGC
 
TGC
6
16
GlyACC
 
GCC
12
CCC
1
TCC
2
15
ProAGG
1
GGG
 
CGG
 
TGG
7
8
ThrAGT
9
GGT
 
CGT
1
TGT
4
14
ValAAC
10
GAC
 
CAC
1
TAC
3
14

Six Box tRNA Sets

IsotypetRNA Count by AnticodonTotal
SerAGA
9
GGA
 
CGA
1
TGA
3
ACT
 
GCT
3
 
 
 
 
16
ArgACG
4
GCG
 
CCG
1
TCG
 
 
 
 
 
CCT
1
TCT
10
16
LeuAAG
 
GAG
1
CAG
 
TAG
4
 
 
 
 
CAA
8
TAA
4
17

Two Box tRNA Sets

IsotypetRNA Count by AnticodonTotal
PheAAA
 
GAA
7
 
 
 
 
7
AsnATT
 
GTT
10
 
 
 
 
10
Lys 
 
 
 
CTT
12
TTT
4
16
AspATC
 
GTC
9
 
 
 
 
9
Glu 
 
 
 
CTC
3
TTC
10
13
HisATG
 
GTG
7
 
 
 
 
7
Gln 
 
 
 
CTG
2
TTG
6
8

Two Box & Other tRNA Sets

IsotypetRNA Count by AnticodonTotal
IleAAT
9
GAT
1
 
 
TAT
2
12
Met 
 
 
 
CAT
9
 
 
9
TyrATA
 
GTA
6
 
 
 
 
6
Supres 
 
 
 
CTA
 
TTA
 
0
CysACA
 
GCA
3
 
 
 
 
3
Trp 
 
 
 
CCA
5
 
 
5
SelCys 
 
 
 
 
 
TCA
1
1

The Genomic tRNA Database is curated by Todd Lowe and Patricia Chan. Please email lowe@soe.ucsc.edu with any questions and comments. To submit corrections, please use our Bug and Request Tracking System.