GtRNAdb

tRNAscan-SE Analysis of Debaryomyces hansenii CBS767

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tRNA Gene Summary





tRNAs Decoding Standard 20 AA220
Selenocysteine tRNAs (TCA)1
Possible suppressor tRNAs (CTA,TTA)0
tRNAs with undetermined
or unknown isotypes
0
Predicted pseudogenes5
Total tRNAs226


Intron Summary

tRNAs with introns
56
Pro
TGG
7
Val
TAC
1
Ser
CGA
1
Ser
GCT
2
Arg
ACG
5
Arg
CCG
1
Phe
GAA
8
Lys
CTT
12
Lys
TTT
7
Ile
TAT
2
Met
CAT
4
Tyr
GTA
6


Four Box tRNA Sets

IsotypetRNA Count by AnticodonTotal
AlaAGC
7
GGC
 
CGC
1
TGC
5
13
GlyACC
 
GCC
11
CCC
1
TCC
4
16
ProAGG
1
GGG
 
CGG
 
TGG
7
8
ThrAGT
8
GGT
 
CGT
1
TGT
3
12
ValAAC
11
GAC
 
CAC
1
TAC
1
13

Six Box tRNA Sets

IsotypetRNA Count by AnticodonTotal
SerAGA
7
GGA
 
CGA
1
TGA
4
ACT
 
GCT
2
 
 
 
 
14
ArgACG
6
GCG
 
CCG
1
TCG
 
 
 
 
 
CCT
1
TCT
11
19
LeuAAG
2
GAG
 
CAG
1
TAG
 
 
 
 
 
CAA
4
TAA
9
16

Two Box tRNA Sets

IsotypetRNA Count by AnticodonTotal
PheAAA
 
GAA
9
 
 
 
 
9
AsnATT
 
GTT
9
 
 
 
 
9
Lys 
 
 
 
CTT
12
TTT
8
20
AspATC
 
GTC
10
 
 
 
 
10
Glu 
 
 
 
CTC
1
TTC
10
11
HisATG
 
GTG
6
 
 
 
 
6
Gln 
 
 
 
CTG
1
TTG
7
8

Two Box & Other tRNA Sets

IsotypetRNA Count by AnticodonTotal
IleAAT
9
GAT
1
 
 
TAT
2
12
Met 
 
 
 
CAT
10
 
 
10
TyrATA
 
GTA
6
 
 
 
 
6
Supres 
 
 
 
CTA
 
TTA
 
0
CysACA
 
GCA
4
 
 
 
 
4
Trp 
 
 
 
CCA
4
 
 
4
SelCys 
 
 
 
 
 
TCA
1
1

The Genomic tRNA Database is curated by Todd Lowe and Patricia Chan. Please email lowe@soe.ucsc.edu with any questions and comments. To submit corrections, please use our Bug and Request Tracking System.