GtRNAdb

tRNAscan-SE Analysis of Drosophila melanogaster (Release 5 Apr 2006)

>> Main Overview
>> tRNAs by Isotype
>> tRNAs by Locus
>> Secondary Structures
>> tRNA Alignments
>> FASTA Seqs
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>> Analysis Notes
>> Genome DB
>> Genome Seq
Structurally Aligned tRNAs (by Isotype & Anticodon)

Structural alignments are generated by aligning tRNA sequences against domain-specific tRNA covariance models with the use of COVE.


[Ala] [Arg] [Asn] [Asp] [Cys] [Gln] [Glu] [Gly] [His] [Ile] [Leu] [Lys] [Met] [Phe] [Pro] [Ser] [Thr] [Trp] [Tyr] [Val]
[Suppressor] [Selenocysteine]


Ala tRNAs

>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<. GGGGATGTAGCTCAGATGGTA.GAGCGCTCGCTTAGCATGTGAGAG...........GtACGGGGATCGATACCCCGCATCTCCA chr3R.trna22-AlaAGC Sc: 63.54 GGGGATGTAGCTCAGATGGTA.GAGCGCTCGCTTAGCATGTGAGAG...........GtACGGGGATCGATGCCCCGCATCTCCA chr3R.trna56-AlaAGC Sc: 59.84 GGGGATGTAGCTCAGATGGTA.GAGCGCTCGCTTAGCATGTGAGAG...........GtACGGGGATCGATGCCCCGCATCTCCA chr3R.trna52-AlaAGC Sc: 59.84 GGGGATGTAGCTCAGATGGTA.GAGCGCTCGCTTAGCATGTGAGAG...........GtACGGGGATCGATGCCCCGCATCTCCA chr3R.trna51-AlaAGC Sc: 59.84 GGGGATGTAGCTCAGATGGTA.GAGCGCTCGCTTAGCATGTGAGAG...........GtACGGGGATCGATGCCCCGCATCTCCA chr3R.trna50-AlaAGC Sc: 59.84 GGGGATGTAGCTCAGATGGTA.GAGCGCTCGCTTAGCATGTGAGAG...........GtACGGGGATCGATGCCCCGCATCTCCA chr3R.trna49-AlaAGC Sc: 59.84 GGGGATGTAGCTCAGATGGTA.GAGCGCTCGCTTAGCATGTGAGAG...........GtACGGGGATCGATGCCCCGCATCTCCA chr3R.trna27-AlaAGC Sc: 59.84 GGGGATGTAGCTCAGATGGTA.GAGCGCTCGCTTAGCATGTGAGAG...........GtACGGGGATCGATGCCCCGCATCTCCA chr3R.trna23-AlaAGC Sc: 59.84 GGGGATGTAGCTCAGATGGTA.GAGCGCTCGCTTAGCATGTGAGAG...........GtACGGGGATCGATGCCCCGCATCTCCA chr3R.trna21-AlaAGC Sc: 59.84 GGGGATGTAGCTCAGATGGTA.GAGCGCTCGCTTAGCATGTGAGAG...........GtACGGGGATCGATGCCCCGCATCTCCA chr3R.trna18-AlaAGC Sc: 59.84 GGGGATGTAGCTCAGATGGTA.GAGCGCTCGCTTAGCATGTGAGAG...........GtACGGGGATCGATGCCCCGCATCTCCA chr3R.trna16-AlaAGC Sc: 59.84 GGGGATGTAGCTCAGATGGTA.GAGCGCTCGCTTAGCATGTGAGAG...........GtACGGGGATCGATGCCCCGCATCTCCA chr3L.trna45-AlaAGC Sc: 59.84 GGGGATGTAGCTCAGATGGTA.GAGCGCTCGCTTAGCATGTGAGAG...........GtACGGGGATCGATGCCCCGCATCTCCA DA9240_AGC_DROSOPHILA_MELANO >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<. GGGGACGTAGCTCAGT.GGTA.GAGCGCTCGCTTCGCATGTGAGAA...........GtCCCGGGTTCAAACCCCGGCGTCTCCA chr2R.trna52-AlaCGC Sc: 76.51 GGGGACGTAGCTCAGT.GGTA.GAGCGCTCGCTTCGCATGTGAGAA...........GtCCCGGGTTCAAACCCCGGCGTCTCCA chr2R.trna51-AlaCGC Sc: 76.51 GGGGACGTAGCTCAGT.GGTA.GAGCGCTCGCTTCGCATGTGAGAA...........GtCCCGGGTTCAAACCCCGGCGTCTCCA chr2R.trna50-AlaCGC Sc: 76.51 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<. GGGGATGTAGCTCAGT.GGTA.GAGCGCTCGCTTTGCATGTGAGAG...........GcCCCGGGTTCGATCCCCGGCATCTCCA chr2R.trna70-AlaTGC Sc: 75.92 GGGGATGTAGCTCAGT.GGTA.GAGCGCTCGCTTTGCATGTGAGAG...........GcCCCGGGTTCAATCCCCGGCATCTCCA chr2R.trna29-AlaTGC Sc: 74.19

Arg tRNAs

>>>>>>>..>>>...........<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<. GGTCCTGTGGCGCAATGGAtA.ACGCGTCTGACTACGGATCAGAAG...........AtTCCAGGTTCGACTCCTGGCAGGATCG chr3R.trna72-ArgACG Sc: 73.12 GGTCCTGTGGCGCAATGGAtA.ACGCGTCTGACTACGGATCAGAAG...........AtTCCAGGTTCGACTCCTGGCAGGATCG chr3R.trna71-ArgACG Sc: 73.12 GGTCCTGTGGCGCAATGGAtA.ACGCGTCTGACTACGGATCAGAAG...........AtTCCAGGTTCGACTCCTGGCAGGATCG chr3R.trna70-ArgACG Sc: 73.12 GGTCCTGTGGCGCAATGGAtA.ACGCGTCTGACTACGGATCAGAAG...........AtTCCAGGTTCGACTCCTGGCAGGATCG chr3R.trna69-ArgACG Sc: 73.12 GGTCCTGTGGCGCAATGGAtA.ACGCGTCTGACTACGGATCAGAAG...........AtTCCAGGTTCGACTCCTGGCAGGATCG chr3R.trna68-ArgACG Sc: 73.12 GGTCCTGTGGCGCAATGGAtA.ACGCGTCTGACTACGGATCAGAAG...........AtTCCAGGTTCGACTCCTGGCAGGATCG chr2R.trna93-ArgACG Sc: 73.12 GGTCCTGTGGCGCAATGGAtA.ACGCGTCTGACTACGGATCAGAAG...........AtTCCAGGTTCGACTCCTGGCAGGATCG chr2R.trna9-ArgACG Sc: 73.12 GGTCCTGTGGCGCAATGGAtA.ACGCGTCTGACTACGGATCAGAAG...........AtTCCAGGTTCGACTCCTGGCAGGATCG chr2R.trna8-ArgACG Sc: 73.12 GGTCCTGTGGCGCAATGGAtA.ACGCGTCTGACTACGGATCAGAAG...........AtTCCAGGTTCGACTCCTGGCAGGATCG chr2R.trna3-ArgACG Sc: 73.12 GGTCCTGTGGCGCAATGGAtA.ACGCGTCTGACTACGGATCAGAAG...........AtTCCAGGTTCGACTCCTGGCAGGATCG chr2R.trna1-ArgACG Sc: 73.12 GGTCCTGTGGCGCAATGGAtA.ACGCGTCTGACTACGGATCAGAAG...........AtTCCAGGTTCGACTCCTGGCAGGATCG DR9240_ACG_DROSOPHILA_MELANO >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<. GACCGTGTGGCCTAATGGAtA.AGGCGTCGGACTTCGGATCCGAAG...........AtTGCAGGTTCGAATCCTGTCACGGTCG chrX.trna21-ArgTCG Sc: 74.10 GACCGTGTGGCCTAATGGAtA.AGGCGTCGGACTTCGGATCCGAAG...........AtTGCAGGTTCGAGTCCTGTCACGGTCG chrX.trna5-ArgTCG Sc: 72.45 GACCGTGTGGCCTAATGGAtA.AGGCGTCGGACTTCGGATCCGAAG...........AtTGCAGGTTCGAGTCCTGTCACGGTCG chrX.trna16-ArgTCG Sc: 72.45 GACCGTGTGGCCTAATGGAtA.AGGCGTCGGACTTCGGATCCGAAG...........AtTGCAGGTTCGAGTCCTGTCACGGTCG chr3R.trna8-ArgTCG Sc: 72.45 GACCGTGTGGCCTAATGGAtA.AGGCGTCGGACTTCGGATCCGAAG...........AtTGCAGGTTCGAGTCCTGTCACGGTCG chr3R.trna7-ArgTCG Sc: 72.45 >>>>>>>..>>>...........<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<. GACCGTGTGGCCCAATGGAtA.AGGCGTCGGACTTCGGATCCGAAG...........AtTGCAGGTTCGAGTCCTGTCACGGTCG chrX.trna9-ArgTCG Sc: 72.12 GACCGTGTGGCCCAATGGAtA.AGGCGTCGGACTTCGGATCCGAAG...........AtTGCAGGTTCGAGTCCTGTCACGGTCG chrX.trna8-ArgTCG Sc: 72.12 GACCGTGTGGCCCAATGGAtA.AGGCGTCGGACTTCGGATCCGAAG...........AtTGCAGGTTCGAGTCCTGTCACGGTCG chrX.trna11-ArgTCG Sc: 72.12 GACCGTGTGGCCCAATGGAtA.AGGCGTCGGACTTCGGATCCGAAG...........AtTGCAGGTTCGAGTCCTGTCACGGTCG chrX.trna10-ArgTCG Sc: 72.12 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<. GACCGTGTGGCCTAAAGGAtA.AGGCGTCGGACTTCGAATCCGAAG...........AtTGCAGGTTCGAGTCCTGTCACGGTCG chr3R.trna1-ArgTCG Sc: 69.30 GACCGTGTGGCCTAATGGAtA.AGGCGTCGGACTTCGGATCCGAAG...........AtTGCAGGTTCGAATCCTGTCACGGTCG DR9241_TCG_DROSOPHILA_MELANO GACCGTGTGGCCTAATGGAtA.AGGCGTCGGACTTCGGATCCGAAG...........AtTGCAGGTTCGAGTCCTGTCACGGTCG DR9242_TCG_DROSOPHILA_MELANO >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<. GCCCCAGTGGCCTAATGGAtA.AGGCATCGGCCTCCTAAGCCGGGG...........AtTGTGGGTTCGAGTCCCATCTGGGGTA chr2R.trna60-ArgCCT Sc: 67.50 GCCCCAGTGGCCTAATGGAtA.AGGCATCGGCCTCCTAAGCCGGGG...........AtTGTGGGTTCGAGTCCCATCTGGGGTA chr2R.trna41-ArgCCT Sc: 67.50 GCCCCAGTGGCCTAATGGAtA.AGGCATCGGCCTCCTAAGCCGGGG...........AtTGTGGGTTCGAGTCCCATCTGGGGTA chr2L.trna9-ArgCCT Sc: 67.50 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<. GTCCCTTTGGCGCAGAGGAtA.GCGCGTTGGACTTCTAATCCAAAG...........GtCGCGGGTTCGATCCCCGCAAGGGATG chr2R.trna82-ArgTCT Sc: 82.67 GACCCTTTAGCGCATTGGAtA.GCGCGTTGGACTTCTAATCCAAAG...........GtGGCGGGTTCGATTCCCGCAAGGGTTG chr2L.trna1-ArgTCT Sc: 74.52 GGCCGTGTAGCCTAATGGAtA.AGGCGTCGGATTTCTGATCCGAAA...........AtTGCGGGTTCAAGTCCCGTCATGGTCG chr2L.trna5-ArgTCT Sc: 66.34

Asn tRNAs

>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<. GCCTCCGTGGCGCAATTGGTtAGCGCGTTCGGCTGTTAACCGAAAG...........GtTGGTGGTTCGAGTCCACCCGGGGGCG chrUextra.trna9-AsnGTT Sc: 86.74 GCCTCCGTGGCGCAATTGGTtAGCGCGTTCGGCTGTTAACCGAAAG...........GtTGGTGGTTCGAGTCCACCCGGGGGCG chrUextra.trna1-AsnGTT Sc: 86.74 GCCTCCGTGGCGCAATTGGTtAGCGCGTTCGGCTGTTAACCGAAAG...........GtTGGTGGTTCGAGTCCACCCGGGGGCG chr3R.trna73-AsnGTT Sc: 86.74 GCCTCCGTGGCGCAATTGGTtAGCGCGTTCGGCTGTTAACCGAAAG...........GtTGGTGGTTCGAGTCCACCCGGGGGCG chr2R.trna99-AsnGTT Sc: 86.74 GCCTCCGTGGCGCAATTGGTtAGCGCGTTCGGCTGTTAACCGAAAG...........GtTGGTGGTTCGAGTCCACCCGGGGGCG chr2R.trna98-AsnGTT Sc: 86.74 GCCTCCGTGGCGCAATTGGTtAGCGCGTTCGGCTGTTAACCGAAAG...........GtTGGTGGTTCGAGTCCACCCGGGGGCG chr2R.trna97-AsnGTT Sc: 86.74 GCCTCCGTGGCGCAATTGGTtAGCGCGTTCGGCTGTTAACCGAAAG...........GtTGGTGGTTCGAGTCCACCCGGGGGCG chr2R.trna92-AsnGTT Sc: 86.74 GCCTCCGTGGCGCAATTGGTtAGCGCGTTCGGCTGTTAACCGAAAG...........GtTGGTGGTTCGAGTCCACCCGGGGGCG chr2R.trna5-AsnGTT Sc: 86.74 GCCTCCGTGGCGCAATTGGTtAGCGCGTTCGGCTGTTAACCGAAAG...........GtTGGTGGTTCGAGTCCACCCGGGGGCG chr2R.trna49-AsnGTT Sc: 86.74 GCCTCCGTGGCGCAATTGGTtAGCGCGTTCGGCTGTTAACCGAAAG...........GtTGGTGGTTCGAGTCCACCCGGGGGCG chr2R.trna4-AsnGTT Sc: 86.74 GCCTCCGTGGCGCAATTGGTtAGCGCGTTCGGCTGTTAACCGAAAG...........GtTGGTGGTTCGAGTCCACCCGGGGGCG chr2R.trna2-AsnGTT Sc: 86.74 GCCTCCGTGGCGCAATTGGTtAGCGCGTTCGGCTGTTAACCGAAAG...........GtTGGTGGTTCGAGTCCACCCGGGGGCG chr2R.trna10-AsnGTT Sc: 86.74 GCCTCCGTGGCGCAATTGGTtAGCGCGTTCGGCTGTTAACCGAAAG...........GtTGGTGGTTCGAGTCCACCCGGGGGCG DN9240_GTT_DROSOPHILA_MELANO

Asp tRNAs

>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<...............>>>>>.......<<<<<<<<<<<<. TCCTCGATAGTATAGTGGTtA.GTATCCCCGCCTGTCACGCGGGAG...........ACCGGGGTTCAATTCCCCGTCGGGGAG chr3R.trna37-AspGTC Sc: 75.34 TCCTCGATAGTATAGTGGTtA.GTATCCCCGCCTGTCACGCGGGAG...........ACCGGGGTTCAATTCCCCGTCGGGGAG chr3R.trna36-AspGTC Sc: 75.34 TCCTCGATAGTATAGTGGTtA.GTATCCCCGCCTGTCACGCGGGAG...........ACCGGGGTTCAATTCCCCGTCGGGGAG chr3L.trna26-AspGTC Sc: 75.34 TCCTCGATAGTATAGTGGTtA.GTATCCCCGCCTGTCACGCGGGAG...........ACCGGGGTTCAATTCCCCGTCGGGGAG chr2L.trna33-AspGTC Sc: 75.34 TCCTCGATAGTATAGTGGTtA.GTATCCCCGCCTGTCACGCGGGAG...........ACCGGGGTTCAATTCCCCGTCGGGGAG chr2L.trna32-AspGTC Sc: 75.34 TCCTCGATAGTATAGTGGTtA.GTATCCCCGCCTGTCACGCGGGAG...........ACCGGGGTTCAATTCCCCGTCGGGGAG chr2L.trna31-AspGTC Sc: 75.34 TCCTCGATAGTATAGTGGTtA.GTATCCCCGCCTGTCACGCGGGAG...........ACCGGGGTTCAATTCCCCGTCGGGGAG chr2L.trna30-AspGTC Sc: 75.34 TCCTCGATAGTATAGTGGTtA.GTATCCCCGCCTGTCACGCGGGAG...........ACCGGGGTTCAATTCCCCGTCGGGGAG chr2L.trna17-AspGTC Sc: 75.34 TCCTCGATAGTATAGTGGTtA.GTATCCCCGCCTGTCACGCGGGAG...........ACCGGGGTTCAATTCCCCGTCGGGGAG chr2L.trna16-AspGTC Sc: 75.34 TCCTCGATAGTATAGTGGTtA.GTATCCCCGCCTGTCACGCGGGAG...........ACCGGGGTTCAATTCCCCGTCGGGGAG chr2L.trna15-AspGTC Sc: 75.34 TCCTCGATAGTATAGTGGTtA.GTATCCCCGCCTGTCACGCGGGAG...........ACCGGGGTTCAATTCCCCGTCGGGGAG chr2L.trna13-AspGTC Sc: 75.34 TCCTCGATAGTATAGTGGTtA.GTATCCCCGCCTGTCACGCGGGAG...........ACCGGGGTTCAATTCCCCGTCGGGGAG chr2L.trna12-AspGTC Sc: 75.34 >>>>.>>..>>>>.........<<<<.>>>>>.......<<<<<...............>>>>>.......<<<<<<<.<<<<. TCCTCGATAGTATAGTGGTtA.GTATCCCCGCCTGTCACGCGGGAG...........ACCGGGGTTCAATTCCCCGTCTGGGAG chr3R.trna42-AspGTC Sc: 68.81 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<...............>>>.>.......<.<<<<<<<<<<. TCCTCGATAGTATAGTGGTtA.GTATCCCCGCCTGTCACGCGGGAG...........ACCGGTGTTCAATTCCCCGTCGGGGAG chr2L.trna8-AspGTC Sc: 68.69 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<...............>>>>>.......<<<<<<<<<<<<. TCCTCGATAGTATAGTGGTtA.GTATCCCCGCCTGTCACGCGGGAG...........ACCGGGGTTCAATTCCCCGTCGGGGAG DD9240_GTC_DROSOPHILA_MELANO

Cys tRNAs

>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<. GGGGATATAGCTCAGTGGTA.GAGCATTCGACTGCAGATCGAGAG...........GtCCCCGGTTCAAACCCGGGTGTCCCCT chr3L.trna18-CysGCA Sc: 75.91 GGGGATATAGCTCAGTGGTA.GAGCATTCGACTGCAGATCGAGAG...........GtCCCCGGTTCAAACCCGGGTGTCCCCT chr3L.trna16-CysGCA Sc: 75.91 GGGGATATAGCTCAGTGGTA.GAGCATTCGACTGCAGATCGAGAG...........GtCCCCGGTTCAAACCCGGGTGTCCCCT chr3L.trna15-CysGCA Sc: 75.91 GGGGATATAGCTCAGTGGTA.GAGCATTCGACTGCAGATCGAGAG...........GtCCCCGGTTCAAACCCGGGTGTCCCCT chr3L.trna14-CysGCA Sc: 75.91 >>>>>>>..>>>>........<<<<..>>>>.......<<<<.................>>>>>.......<<<<<<<<<<<<. GGGGGCATAGCTCAGGGGTA.GAGCGTTCGACTGCAGATCGACAG...........GtCCCTGGTTCAAATCCGGGTGCCCCCT chr3L.trna12-CysGCA Sc: 75.79 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<. GGGGGTATAGCTCAGGGGTA.GAGCATTCGACTGCAGATCGAGAG...........GtCCCCGGTTCAAATCCGGGTGCCCCCT chr3L.trna13-CysGCA Sc: 74.46 GGGGGTATAGCTCAGGGGCA.GAGCATTCGACTGCAGATCGAGAG...........GtCCCCGGTTCAAATCCGGGTGCCCCCT chr3L.trna34-CysGCA Sc: 70.54

Gln tRNAs

>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<...............>>>>>.......<<<<<<<<<<<<. GGTTCCATGGTGTAATGGTtA.GCACTCTGGACTCTGAATCCAGCG...........ATCCGAGTTCAAATCTCGGTGGAACCT chr2R.trna73-GlnCTG Sc: 73.65 GGTTCCATGGTGTAATGGTtA.GCACTCAGGACTCTGAATCCTGCG...........ATCCGAGTTCAAATCTCGGTGGAACCT chrX.trna1-GlnCTG Sc: 72.37 GGTTCCATGGTGTAATGGTtA.GCACTCAGGACTCTGAATCCTGCG...........ATCCGAGTTCAAATCTCGGTGGAACCT chr2L.trna39-GlnCTG Sc: 72.37 GGTTCCATGGTGTAATGGTtA.GCACTCAGGACTCTGAATCCTGCG...........ATCCGAGTTCAAATCTCGGTGGAACCT chr2L.trna37-GlnCTG Sc: 72.37 GGTTCCATGGTGTAATGGTtA.GCACTCAGGACTCTGAATCCTGCG...........ATCCGAGTTCAAATCTCGGTGGAACCT chr2L.trna3-GlnCTG Sc: 72.37 GGTTCCATGGTGTAATGGTtA.GCACTCAGGACTCTGAATCCTGCG...........ATCCGAGTTCAAATCTCGGTGGAACCT chr2L.trna2-GlnCTG Sc: 72.37 GGTTCTATGGTGTAATGGTtA.GCACTCAGGACTCTGAATCCTGCG...........ATCCGAGTTCAAATCTCGGTAGAACCT chr2L.trna38-GlnCTG Sc: 71.12 GGTTCTATGGTGTAATGGTtA.GCACTTTGGACTCTGAATCCAGCG...........ATCCGAGTTCAAATCTCGGTAGAACCT chr2L.trna28-GlnCTG Sc: 69.04 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<...............>>>>>.......<<<<<<<<<<<<. GGTTCTATGGTGTAATGGTtA.GCACTCTGGACTTTGAATCCAGCG...........ATCCGAGTTCAAATCTCGGTAGAACCT chr3R.trna41-GlnTTG Sc: 72.03 GGTTCTATGGTGTAATGGTtA.GCACTCTGGACTTTGAATCCAGCG...........ATCCGAGTTCAAATCTCGGTAGAACCT chr3R.trna40-GlnTTG Sc: 72.03 GGTTCTATGGTGTAATGGTtA.GCACTCTGGACTTTGAATCCAGCG...........ATCCGAGTTCAAATCTCGGTAGAACCT chr3L.trna38-GlnTTG Sc: 72.03 GGTTCTATGGTGTAACGGTtA.GCACTCTGGACTTTGAATCCAGCG...........ATCCGAGTTCAAATCTCGGTAGAACCT chrX.trna26-GlnTTG Sc: 69.58

Glu tRNAs

>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<..................>>>>>.......<<<<<<<<<<<<.... TCCCATATTGTCTAGTGGTtA.GGATATCCGGCTCTCACCCGGAAG..............GCCCGGGTTCGATTCCCGGTATGGGAA... chr2R.trna25-GluCTC Sc: 79.25 TCCCATATTGTCTAGTGGTtA.GGATACCCGGCTCTCACCCGGGAG..............GCCCGGGTTCAATTCCCGGTATGGGAA... chr3L.trna33-GluCTC Sc: 77.90 TCCCATATTGTCTAGTGGTtA.GGATACCCGGCTCTCACCCGGGAG..............GCCCGGGTTCAATTCCCGGTATGGGAA... chr2R.trna61-GluCTC Sc: 77.90 TCCCATATTGTCTAGTGGTtA.GGATACCCGGCTCTCACCCGGGAG..............GCCCGGGTTCAATTCCCGGTATGGGAA... chr2R.trna38-GluCTC Sc: 77.90 TCCCATATTGTCTAGTGGTtA.GGATATCCGGCTCTCACCCGGAAG..............GCCCGGGTTCAATTCCCGGTATGGGAA... chrUextra.trna8-GluCTC Sc: 77.51 TCCCATATTGTCTAGTGGTtA.GGATATCCGGCTCTCACCCGGAAG..............GCCCGGGTTCAATTCCCGGTATGGGAA... chrUextra.trna7-GluCTC Sc: 77.51 TCCCATATTGTCTAGTGGTtA.GGATATCCGGCTCTCACCCGGAAG..............GCCCGGGTTCAATTCCCGGTATGGGAA... chrUextra.trna6-GluCTC Sc: 77.51 TCCCATATTGTCTAGTGGTtA.GGATATCCGGCTCTCACCCGGAAG..............GCCCGGGTTCAATTCCCGGTATGGGAA... chrUextra.trna5-GluCTC Sc: 77.51 TCCCATATTGTCTAGTGGTtA.GGATATCCGGCTCTCACCCGGAAG..............GCCCGGGTTCAATTCCCGGTATGGGAA... chrUextra.trna4-GluCTC Sc: 77.51 TCCCATATTGTCTAGTGGTtA.GGATATCCGGCTCTCACCCGGAAG..............GCCCGGGTTCAATTCCCGGTATGGGAA... chr3L.trna9-GluCTC Sc: 77.51 TCCCATATTGTCTAGTGGTtA.GGATATCCGGCTCTCACCCGGAAG..............GCCCGGGTTCAATTCCCGGTATGGGAA... chr3L.trna8-GluCTC Sc: 77.51 TCCCATATTGTCTAGTGGTtA.GGATATCCGGCTCTCACCCGGAAG..............GCCCGGGTTCAATTCCCGGTATGGGAA... chr3L.trna7-GluCTC Sc: 77.51 TCCCATATTGTCTAGTGGTtA.GGATATCCGGCTCTCACCCGGAAG..............GCCCGGGTTCAATTCCCGGTATGGGAA... chr3L.trna6-GluCTC Sc: 77.51 TCCCATATTGTCTAGTGGTtA.GGATATCCGGCTCTCACCCGGAAG..............GCCCGGGTTCAATTCCCGGTATGGGAA... chr3L.trna5-GluCTC Sc: 77.51 TCCCATATTGTCTAGTGGTtA.GGATATCCGGCTCTCACCCGGAAG..............GCCCGGGTTCAATTCCCGGTATGGGAA... chr3L.trna4-GluCTC Sc: 77.51 TCCCATATTGTCTAGTGGTtA.GGATATCCGGCTCTCACCCGGAAG..............GCCCGGGTTCAATTCCCGGTATGGGAA... chr3L.trna3-GluCTC Sc: 77.51 TCCCATATTGTCTAGTGGTtA.GGATATCCGGCTCTCACCCGGAAG..............GCCCGGGTTCAATTCCCGGTATGGGAA... chr3L.trna11-GluCTC Sc: 77.51 TCCCATATTGTCTAGTGGTtA.GGATATCCGGCTCTCACCCGGAAG..............GCCCGGGTTCAATTCCCGGTATGGGAA... chr3L.trna10-GluCTC Sc: 77.51 >>>.>>>..>.>>.........<<.<.>>>>>.......<<<<<..................>..>>.......<<..<<<<.<<<.... TCCCATATTGTCTAGTGGTtA.GGCTACCCGGCTCTCACCCGGGAG..............GCCCAGGTTCAGTTCCCTGTATAGGAA... chr2R.trna39-GluCTC Sc: 45.43 >>>>>>...>>>>.........<<<<.>>>>>.......<<<<<....................>>>.......<<<...<<<<<<.... CTTTGCGTAGCTTAGGGGTtA.GAGCATTCGACTCTCGTTTGAAAGTGA...........AC..GGGTTCAAATCCC..AGTAGGGT... chrX.trna3-GluCTC Sc: 30.14 Pseudo >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<..................>>>>>.......<<<<<<<<<<<<.... TCCTATATTGTCTAGTGGTtA.GGATATCCGGCTCTCACCCGGAAG..............GCCCGGGTTCAATTCCCGGTATGGGAA... DE9240_CTC_DROSOPHILA_MELANO TCCCATATTGTCTAGTGGTtA.GGATATCCGGCTCTCACCCGGAAG..............GCCCGGGTTCAATTCCCGGTATGGGAA... DE9241_CTC_DROSOPHILA_MELANO >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<..................>>>>>.......<<<<<<<<<<<<.... TCCCATATGGTCTAGTGGCtA.GGATATCTGGCTTTCACCCAGAAG..............GCCCGGGTTCGATTCCCGGTATGGGAA... chr2R.trna72-GluTTC Sc: 80.27 TCCCATATGGTCTAGTGGCtA.GGATATCTGGCTTTCACCCAGAAG..............GCCCGGGTTCGATTCCCGGTATGGGAA... chr2R.trna66-GluTTC Sc: 80.27 TCCCATATGGTCTAGTGGCtA.GGATATCTGGCTTTCACCCAGAAG..............GCCCGGGTTCGATTCCCGGTATGGGAA... chr2R.trna64-GluTTC Sc: 80.27 TCCCATATGGTCTAGTGGCtA.GGATATCTGGCTTTCACCCAGAAG..............GCCCGGGTTCGATTCCCGGTATGGGAA... chr2R.trna63-GluTTC Sc: 80.27 TCCCATATGGTCTAGTGGCtA.GGATATCTGGCTTTCACCCAGAAG..............GCCCGGGTTCGATTCCCGGTATGGGAA... chr2R.trna62-GluTTC Sc: 80.27 TCCCATATGGTCTAGTGGCtA.GGATATCTGGCTTTCACCCAGAAG..............GCCCGGGTTCGATTCCCGGTATGGGAA... chr2R.trna26-GluTTC Sc: 80.27 TCCCATATGGTCTAGTGGCtA.GGATATCTGGCTTTCACCCAGAAG..............GCCCGGGTTCGATTCCCGGTATGGGAA... DE9242_TTC_DROSOPHILA_MELANO TCCCATATGGTCTAGTGGCtA.GGATATCTGGCTTTCACCCAGAAG..............GCCCGGGTTCGATTCCCGGTATGGGAAcca RE9240_TTC_DROSOPHILA_MELANO

Gly tRNAs

>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<...............>>>>>.......<<<<<<<<<<<<. GCATCGGTGGTTCAGTGGT.A.GAATGCTCGCCTGCCACGCGGGCG...........GCCCGGGTTCGATTCCCGGCCGATGCA chr2R.trna68-GlyGCC Sc: 82.25 GCATCGGTGGTTCAGTGGT.A.GAATGCTCGCCTGCCACGCGGGCG...........GCCCGGGTTCGATTCCCGGCCGATGCA chr2R.trna57-GlyGCC Sc: 82.25 GCATCGGTGGTTCAGTGGT.A.GAATGCTCGCCTGCCACGCGGGCG...........GCCCGGGTTCGATTCCCGGCCGATGCA chr2R.trna47-GlyGCC Sc: 82.25 GCATCGGTGGTTCAGTGGT.A.GAATGCTCGCCTGCCACGCGGGCG...........GCCCGGGTTCGATTCCCGGCCGATGCA chr2R.trna43-GlyGCC Sc: 82.25 GCATCGGTGGTTCAGTGGT.A.GAATGCTCGCCTGCCACGCGGGCG...........GCCCGGGTTCGATTCCCGGCCGATGCA chr2R.trna42-GlyGCC Sc: 82.25 GCATCGGTGGTTCAGTGGT.A.GAATGCTCGCCTGCCACGCGGGCG...........GCCCGGGTTCGATTCCCGGCCGATGCA chr2R.trna27-GlyGCC Sc: 82.25 GCATCGGTGGTTCAGTGGT.A.GAATGCTCGCCTGCCACGCGGGCG...........GCCCGGGTTCGATTCCCGGCCGATGCA chr2L.trna40-GlyGCC Sc: 82.25 GCATCGGTGGTTCAGTGGT.A.GAATGCTCGCCTGCCACGCGGGCG...........GCCCGGGTTCGATTCCCGGCCGATGCA chr2L.trna4-GlyGCC Sc: 82.25 GCATCGGTGGTTCAGTGGT.A.GAATGCTCGCCTGCCACGCGGGCG...........GCCCGGGTTCGATTCCCGGCCGATGCA chr2L.trna27-GlyGCC Sc: 82.25 GCATCGGTGGTTCAGTGGT.A.GAATGCTCGCCTGCCACGCGGGCG...........GCCCGGGTTCGATTCCCGGCCGATGCA chr2L.trna26-GlyGCC Sc: 82.25 GCATCGGTGGTTCAGTGGT.A.GAATGCTCGCCTGCCACGCGGGCG...........GCCCGGGTTCGATTCCCGGCCGATGCA chr2L.trna25-GlyGCC Sc: 82.25 GCATCGGTGGTTCAGTGGT.A.GAATGCTCGCCTGCCACGCGGGCG...........GCCCGGGTTCGATTCCCGGCCGATGCA chr2L.trna19-GlyGCC Sc: 82.25 GCATCGGTGGTTCAGTGGT.A.GAATGCTCGCCTGCCACGCGGGCG...........GCCCGGGTTCGATTCCCGGCCGATGCA chr2L.trna10-GlyGCC Sc: 82.25 GCATCGGTGGTTCAGTGGT.A.GAATGCTCGCCTGCCACGCGGGCG...........GCCTGGGTTCGATTCCCGGCCGATGCA chr2L.trna24-GlyGCC Sc: 77.95 GCATCGGTGGTTCAGTGGT.A.GAATGCTCGCCTGCCACGCGGGCG...........GCCCGGGTTCGATTCCCGGCCGATGCA DG9240_GCC_DROSOPHILA_MELANO >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>.......<<<<.<<<<<<<. GCATCGGTGGTTCAGTGGT.A.GAATGCTCGCCTGCCACGCGGGCG...........GCCCGGGTTCGATTCCCGACCGATGCA DG9241_GCC_DROSOPHILA_MELANO >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<...............>>>>>.......<<<<<<<<<<<<. GCGTCGGTGGTGTAATGGTtA.GCATAGTTGCCTTCCAAGCAGTTG...........ACCCGGGTTCGATTCCCGGCCGACGCA chr3R.trna76-GlyTCC Sc: 76.96 GCGTCGGTGGTGTAATGGTtA.GCATAGTTGCCTTCCAAGCAGTTG...........ACCCGGGTTCGATTCCCGGCCGACGCA chr3R.trna4-GlyTCC Sc: 76.96 GCGTCGGTGGTGTAATGGTtA.GCATAGTTGCCTTCCAAGCAGTTG...........ACCCGGGTTCGATTCCCGGCCGACGCA chr3R.trna25-GlyTCC Sc: 76.96 GCGTCGGTGGTGTAATGGTtA.GCATAGTTGCCTTCCAAGCAGTTG...........ACCCGGGTTCGATTCCCGGCCGACGCA chr3R.trna24-GlyTCC Sc: 76.96 GCGTCGGTGGTGTAATGGTcA.GCATAGTTGCCTTCCAAGCAGTTG...........ATCCGGGTTCGATTCCCGGCCGACGCA chr2R.trna55-GlyTCC Sc: 72.21 GCGTCGGTGGTGTAATGGTcA.GCATAGTTGCCTTCCAAGCAGTTG...........ATCCGGGTTCGATTCCCGGCCGACGCA chr2R.trna54-GlyTCC Sc: 72.21

His tRNAs

.>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<...............>>>>>.......<<<<<<<<<<<<.... .GCCGTGATCGTCTAGTGGTtA.GGACCCCACGTTGTGGCCGTGGTA...........ACCCAGGTTCGAATCCTGGTCACGGCA... chr2R.trna80-HisGTG Sc: 67.15 .GCCGTGATCGTCTAGTGGTtA.GGACCCCACGTTGTGGCCGTGGTA...........ACCCAGGTTCGAATCCTGGTCACGGCA... chr2R.trna79-HisGTG Sc: 67.15 .GCCGTGATCGTCTAGTGGTtA.GGACCCCACGTTGTGGCCGTGGTA...........ACCCAGGTTCGAATCCTGGTCACGGCA... chr2R.trna78-HisGTG Sc: 67.15 .GCCGTGATCGTCTAGTGGTtA.GGACCCCACGTTGTGGCCGTGGTA...........ACCCAGGTTCGAATCCTGGTCACGGCA... chr2R.trna67-HisGTG Sc: 67.15 .GCCGTGATCGTCTAGTGGTtA.GGACCCCACGTTGTGGCCGTGGTA...........ACCCAGGTTCGAATCCTGGTCACGGCA... chr2R.trna17-HisGTG Sc: 67.15 .GCCGTGATCGTCTAGTGGTtA.GGACCCCACGTTGTGGCCGTGGTA...........ACCCAGGTTCGAATCCTGGTCACGGCA... DH9240_GTG_DROSOPHILA_MELANO gGCCGTGATCGTCTAGTGGTtA.GGACCCCACGTTGTGGCCGTGGTA...........ACCCAGGTTCGAATCCTGGTCACGGCAcca RH9240_GTG_DROSOPHILA_MELANO

Ile tRNAs

>>>>>>>..>>>>.........<<<<.>>>>>.................................<<<<<................>.>>>.........<<<.<<<<<<<<. GGCCCATTAGCTCAGTTGGTtAGAGCGTCGTGCTAATA..........................ACGCGAAG...........GtCGCGGGTTCGAT..CCCCTCATGGGCCA chr2R.trna77-IleAAT Sc: 82.79 GGCCCATTAGCTCAGTTGGTtAGAGCGTCGTGCTAATA..........................ACGCGAAG...........GtCGCGGGTTCGAT..CCCCTCATGGGCCA chr2R.trna7-IleAAT Sc: 82.79 GGCCCATTAGCTCAGTTGGTtAGAGCGTCGTGCTAATA..........................ACGCGAAG...........GtCGCGGGTTCGAT..CCCCTCATGGGCCA chr2R.trna36-IleAAT Sc: 82.79 GGCCCATTAGCTCAGTTGGTtAGAGCGTCGTGCTAATA..........................ACGCGAAG...........GtCGCGGGTTCGAT..CCCCTCATGGGCCA chr2R.trna24-IleAAT Sc: 82.79 GGCCCATTAGCTCAGTTGGTtAGAGCGTCGTGCTAATA..........................ACGCGAAG...........GtCGCGGGTTCGAT..CCCCTCATGGGCCA chr2R.trna22-IleAAT Sc: 82.79 GGCCCATTAGCTCAGTTGGTtAGAGCGTCGTGCTAATA..........................ACGCGAAG...........GtCGCGGGTTCGAT..CCCCTCATGGGCCA chr2R.trna21-IleAAT Sc: 82.79 GGCCCATTAGCTCAGTTGGTtAGAGCGTCGTGCTAATA..........................ACGCGAAG...........GtCGCGGGTTCGAT..CCCCTCATGGGCCA chr2R.trna20-IleAAT Sc: 82.79 GGCCCATTAGCTCAGTTGGTtAGAGCGTCGTGCTAATA..........................ACGCGAAG...........GtCGCGGGTTCGAT..CCCCTCATGGGCCA chr2R.trna19-IleAAT Sc: 82.79 GGCCCATTAGCTCAGTTGGTtAGAGCGTCGTGCTAATA..........................ACGCGAAG...........GtCGCGGGTTCGAT..CCCCTCATGGGCCA chr2R.trna11-IleAAT Sc: 82.79 >>>..>>..>>>>.........<<<<.>>>>>.................................<<<<<................>.>>>.........<<<.<<<..<<<. GACCCATTTGCTCAGTTGGTtAGAGCGTCGTGCTAATA..........................ACGCGAAG...........GtCGCGGGTTCAAAatCCCCTCAT.TGTCG chrX.trna19-IleAAT Sc: 44.17 Pseudo >>>>>>>..>>>>.........<<<<.>>>>>.................................<<<<<................>.>>>.........<<<.<<<<<<<<. GGCCCATTAGCTCAGTTGGTtAGAGCGTCGTGCTAATA..........................ACGCGAAG...........GtCGCGGGTTCGAT..CCCCTCATGGGCCA DI9240_AAT_DROSOPHILA_MELANO >>>>>>>..>>>>.........<<<<.>>>>>.................................<<<<<................>>>>>.........<<<<<<<<<<<<. GCTCCAGTGGCGCAATTGGTtAGCGCACGGTACTTATAatcagtattctgtgtgtatatgagctATGCCGGG...........GtTGTGAGTTCGAG..CCTCACCTGGAGCA chr3L.trna2-IleTAT Sc: 65.99 GCTCCAGTGGCGCAATTGGTtAGCGCACGGTACTTATAatcagtattctgtgtgtatgagct..ATGCCGGG...........GtTGTGAGTTCGAG..CCTCACCTGGAGCA chr3L.trna1-IleTAT Sc: 65.59

Leu tRNAs

>>>>>>>..>>>.............<<<.>>>>>...................................................<<<<<.>>>>............<<<<..>>>>>.......<<<<<.<<<<<<<. GGTAGCGTGGCCGAGC.GGTctA.AGGCGCTGGTTTAAGG............................................CACCAGTCTCC..TC........GGAGGCGTGGGTTCGAATCCCAC.CGCTGCCA chr2R.trna74-LeuAAG Sc: 71.48 GGTAGCGTGGCCGAGC.GGTctA.AGGCGCTGGTTTAAGG............................................CACCAGTCTCC..TC........GGAGGCGTGGGTTCGAATCCCAC.CGCTGCCA chr2R.trna71-LeuAAG Sc: 71.48 GGTAGCGTGGCCGAGC.GGTctA.AGGCGCTGGTTTAAGG............................................CACCAGTCTCC..TC........GGAGGCGTGGGTTCGAATCCCAC.CGCTGCCA chr2R.trna32-LeuAAG Sc: 71.48 GGTAGCGTGGCCGAGC.GGTctA.AGGCGCTGGTTTAAGG............................................CACCAGTCTCC..TC........GGAGGCGTGGGTTCGAATCCCAC.CGCTGCCA chr2R.trna28-LeuAAG Sc: 71.48 GGTAGCGTGGCCGAGCGGGTctA.AGGCGCTGGTTTAAGG............................................CACCAGTCTCC..TC........GGAGGCGTGGGTTCGAATCCCAC.CGCTGCCA chrUextra.trna2-LeuAAG Sc: 68.04 >>>>>>>..>>>.............<<<.>>>>>...................................................<<<<<.>>>>............<<<<..>>>>>.......<<<<<.<<<<<<<. GTCAGGATGGCCGAGT.GGTctA.AGGCGCTGCGTTCAGG............................................TCGCAGTCTAC..TCT.......GTAGGCGTGGGTTCGAATCCCAC.TTCTGACA chr3L.trna44-LeuCAG Sc: 77.88 GTCAGGATGGCCGAGT.GGTctA.AGGCGCTGCGTTCAGG............................................TCGCAGTCTAC..TCT.......GTAGGCGTGGGTTCGAATCCCAC.TTCTGACA chr3L.trna43-LeuCAG Sc: 77.88 GTCAGGATGGCCGAGT.GGTctA.AGGCGCTGCGTTCAGG............................................TCGCAGTCTAC..TCT.......GTAGGCGTGGGTTCGAATCCCAC.TTCTGACA chr3L.trna42-LeuCAG Sc: 77.88 GTCAGGATGGCCGAGT.GGTctA.AGGCGCTGCGTTCAGG............................................TCGCAGTCTAC..TCT.......GTAGGCGTGGGTTCGAATCCCAC.TTCTGACA chr3L.trna41-LeuCAG Sc: 77.88 GTCAGGATGGCCGAGT.GGTctA.AGGCGCTGCGTTCAGG............................................TCGCAGTCTAC..TCT.......GTAGGCGTGGGTTCGAATCCCAC.TTCTGACA chr3L.trna40-LeuCAG Sc: 77.88 GTCAGGATGGCCGAGT.GGTctA.AGGCGCTGCGTTCAGG............................................TCGCAGTCTAC..TCT.......GTAGGCGTGGGTTCGAATCCCAC.TTCTGACA chr3L.trna39-LeuCAG Sc: 77.88 GTCAGGATGGCCGAGT.GGTctA.AGGCGCTGCGTTCAGG............................................TCGCAGTCTAC..TCT.......GTAGGCGTGGGTTCGAATCCCAC.TTCTGACA chr3L.trna32-LeuCAG Sc: 77.88 GTCAGGATGGCCGAGT.GGTctA.AGGCGCTGCGTTCAGG............................................TCGCAGTCTAC..TCT.......GTAGGCGTGGGTTCGAATCCCAC.TTCTGACA chr2R.trna12-LeuCAG Sc: 77.88 GTCAGGATGGCCGAGT.GGTctA.AGGCGCTGCGTTCAGG............................................TCGCAGTCTAC..TCT.......GTAGGCGTGGGTTCGAATCCCAC.TTCTGACA DL9241_CAG_DROSOPHILA_MELANO >>>>>>>..>>>.............<<<.>>>>>...................................................<<<<<.>>................<<..>>>>>.......<<<<<.<<<<<<<. GGCAGCGTGGCCGAGC.GGTctA.AGGCGCTGGTTTTAGG............................................CACCAGTCCGA............AAGGGCGTGGGTTCGAATCCCAC.CGCTGTCA chr3R.trna39-LeuTAG Sc: 69.19 GGCAGCGTGGCCGAGC.GGTctA.AGGCGCTGGTTTTAGG............................................CACCAGTCCGA............AAGGGCGTGGGTTCGAATCCCAC.CGCTGTCA chr3R.trna38-LeuTAG Sc: 69.19 >>>>>>>..>>>.............<<<.>>>>>...................................................<<<<<.>>>>............<<<<..>>>>>.......<<<<<.<<<<<<<. GTCAGGATGGCCGAGC.GGTctA.AGGCGCCAGACTCAAGattgaaaatcttactttctgaacgaaagtgtttgtgaatgagcgTTCTGGTCCTC..TTT.......GAGGGCGTGGGTTCGAATCCCAC.TTCTGACA chr2R.trna23-LeuCAA Sc: 72.67 GTCAGGATGGCCGAGC.GGTctA.AGGCGCCAGACTCAAGatttaaaatcttactttctgaacgaaagcgtatgagcg......TTCTGGTCCTC..TCT.......GAGGGCGTGGGTTCGAATCCCAC.TTCTGACA chr2R.trna76-LeuCAA Sc: 72.14 GTCAGGATGGCCGAGC.GGTctA.AGGCGCCAGACTCAAGagcgaaagtctcttacctttcacagcaaggttcgattgagcg..TTCTGGTCCTC..TCT.......GAGGGCGTGGGTTCGAATCCCAC.TTCTGACA chr3L.trna25-LeuCAA Sc: 68.33 GTCAGGATGGCCGAGC.GGTctA.AGGCGCCAGACTCAAGgcattcagtcttgcccttcgcagaagggcgtgtacgagcg....TTCTGGTCCTC..TCT.......GAGGGCGTGGGTTCGAATCCCAC.TTCTGACA chr3R.trna43-LeuCAA Sc: 65.38 GTCAGGATGGCCGAGC.GGTctA.AGGCGCCAGACTCAAG............................................TTCTGGTCCTC..TCT.......GAGGGCGTGGGTTCGAATCCCAC.TTCTGACA DL9240_CAA_DROSOPHILA_MELANO >>>>>>>..>>>.............<<<.>>>>>...................................................<<<<<.>>>>............<<<<..>>>>>.......<<<<<.<<<<<<<. GCCAGGTTGGCCGAGC.GGTctA.AGGCGCCAGATTTAAG............................................CTCTGGTTCTC..GTGA......GAGAGCGTGGGTTCGAACCCCAC.ACCTGGCA chr3R.trna46-LeuTAA Sc: 70.06 GCCAGGTTGGCCGAGC.GGTctA.AGGCGCCAGATTTAAG............................................CTCTGGTTCTCGA........GAGAGAGCGTGGGTTCGAACCCCAC.ACCTGGCA chr3R.trna34-LeuTAA Sc: 69.13 GCCAGGTTGGCCGAGC.GGTctA.AGGCGCCAGATTTAAG............................................CTCTGGTTCTCGA........GAGAGAGCGTGGGTTCGAGTCCCAC.ACCTGGCA chr2L.trna22-LeuTAA Sc: 68.86 GTCAGGTTGGCCGAGC.GGTctA.AGGCGCCAGATTTAAG............................................CTCTGGTTCTCGA........GAGGGAGCGTGGGTTCGAACCCCAC.ACCTGACA chr3R.trna35-LeuTAA Sc: 68.33

Lys tRNAs

>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGG...........GtCGTGGGTTCGAGCCCCACGTTGGGCG... chr3L.trna48-LysCTT Sc: 80.47 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGG...........GtCGTGGGTTCGAGCCCCACGTTGGGCG... chr3L.trna17-LysCTT Sc: 80.47 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGG...........GtCGTGGGTTCGAGCCCCACGTTGGGCG... chr2R.trna96-LysCTT Sc: 80.47 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGG...........GtCGTGGGTTCGAGCCCCACGTTGGGCG... chr2R.trna95-LysCTT Sc: 80.47 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGG...........GtCGTGGGTTCGAGCCCCACGTTGGGCG... chr2R.trna94-LysCTT Sc: 80.47 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGG...........GtCGTGGGTTCGAGCCCCACGTTGGGCG... chr2R.trna91-LysCTT Sc: 80.47 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGG...........GtCGTGGGTTCGAGCCCCACGTTGGGCG... chr2R.trna90-LysCTT Sc: 80.47 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGG...........GtCGTGGGTTCGAGCCCCACGTTGGGCG... chr2R.trna89-LysCTT Sc: 80.47 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGG...........GtCGTGGGTTCGAGCCCCACGTTGGGCG... chr2R.trna88-LysCTT Sc: 80.47 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGG...........GtCGTGGGTTCGAGCCCCACGTTGGGCG... chr2R.trna75-LysCTT Sc: 80.47 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGG...........GtCGTGGGTTCGAGCCCCACGTTGGGCG... chr2R.trna6-LysCTT Sc: 80.47 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGG...........GtCGTGGGTTCGAGCCCCACGTTGGGCG... chr2R.trna40-LysCTT Sc: 80.47 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGG...........GtCGTGGGTTCGAGCCCCACGTTGGGCG... chr2R.trna100-LysCTT Sc: 80.47 >.>>>>...>>>>........<<<<..>>>.........<<<.................>>.>>.......<<.<<.<<<<.<.... GCTTGAATAGCTTAGTTGGTAAAGCGTTGGATTCTTAAATCATTG...........GtACACGGTTCAAGTTCATGCTCAGATG... chr3R.trna79-LysCTT Sc: 28.65 Pseudo >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGG...........GtCGTGGGTTCGAGCCCCACGTTGGGCG... DK9240_CTT_DROSOPHILA_MELANO GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGG...........GtCGTGGGTTCGAGCCCCACGTTGGGCGcca RK9240_CTT_DROSOPHILA_MELANO >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCCCGGGTAGCTCAGTCGGTAGAGCATTGGACTTTTAATCCAAGG...........GtCCAGGGTTCAAGTCCCTGCTCGGGCG... chr2L.trna11-LysTTT Sc: 84.71 GCCCGGATAGCTCAGTCGGTAGAGCATTGGACTTTTAATCCAAGG...........GtCCAGGGTTCAAGTCCCTGTTCGGGCG... chr3R.trna9-LysTTT Sc: 84.31 GCCCGGATAGCTCAGTCGGTAGAGCATTGGACTTTTAATCCAAGG...........GtCCAGGGTTCAAGTCCCTGTTCGGGCG... chr3R.trna78-LysTTT Sc: 84.31 GCCCGGATAGCTCAGTCGGTAGAGCATTGGACTTTTAATCCAAGG...........GtCCAGGGTTCAAGTCCCTGTTCGGGCG... chr3R.trna77-LysTTT Sc: 84.31 GCCCGGATAGCTCAGTCGGTAGAGCATTGGACTTTTAATCCAAGG...........GtCCAGGGTTCAAGTCCCTGTTCGGGCG... chr3R.trna3-LysTTT Sc: 84.31 GCCCGGATAGCTCAGTCGGTAGAGCATTGGACTTTTAATCCAAGG...........GtCCAGGGTTCAAGTCCCTGTTCGGGCG... chr3R.trna2-LysTTT Sc: 84.31 GCCCGGATAGCTCAGTCGGTAGAGCATTGGACTTTTAATCCAAGG...........GtCCAGGGTTCAAGTCCCTGTTCGGGCG... DK9241_TTT_DROSOPHILA_MELANO GCCCGGATAGCTCAGTCGGTAGAGCATTGGACTTTTAATCCAAGG...........GtCCAGGGTTCAAGTCCCTGTTCGGGCGcca RK9241_TTT_DROSOPHILA_MELANO

Met tRNAs

>>>>>>>..>>>>..........<<<<.>>>>.........<<<<................>>>>>.......<<<<<<<<<<<<.... GCCTCGGTGGCGCAGTTGGC.A.GCGCGTAAGTCTCATAATCTTAAG...........GtCGTGAGTTCGAGCCTCACCCGGGGCA... chr3R.trna80-MetCAT Sc: 79.43 GCCTCGGTGGCGCAGTTGGC.A.GCGCGTAAGTCTCATAATCTTAAG...........GtCGTGAGTTCGAGCCTCACCCGGGGCA... chr3L.trna30-MetCAT Sc: 79.43 GCCTCGGTGGCGCAGTTGGC.A.GCGCGTAAGTCTCATAATCTTAAG...........GtCGTGAGTTCGAGCCTCACCCGGGGCA... chr3L.trna29-MetCAT Sc: 79.43 GCCTCGGTGGCGCAGTTGGC.A.GCGCGTAAGTCTCATAATCTTAAG...........GtCGTGAGTTCGAGCCTCACCCGGGGCA... chr2R.trna81-MetCAT Sc: 79.43 GCCTCGGTGGCGCAGTTGGC.A.GCGCGTAAGTCTCATAATCTTAAG...........GtCGTGAGTTCGAGCCTCACCCGGGGCA... chr2R.trna16-MetCAT Sc: 79.43 GCCTCGATGGCGCAGTTGGC.A.GCGCGTAAGTCTCATAATCTTAAG...........GtCGTGAGTTCGAGCCTCACTCGGGGCA... chr3L.trna47-MetCAT Sc: 79.03 >>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... AGCAGAGTGGCGCAGT.GGA.A.GCGTGCTGGGCCCATAACCCAGAG...........GtCCGAGGATCGAAACCTTGCTCTGCTA... chr3L.trna49-MetCAT Sc: 70.82 AGCAGAGTGGCGCAGT.GGA.A.GCGTGCTGGGCCCATAACCCAGAG...........GtCCGAGGATCGAAACCTTGCTCTGCTA... chr3L.trna36-MetCAT Sc: 70.82 AGCAGAGTGGCGCAGT.GGA.A.GCGTGCTGGGCCCATAACCCAGAG...........GtCCGAGGATCGAAACCTTGCTCTGCTA... chr3L.trna28-MetCAT Sc: 70.82 AGCAGAGTGGCGCAGT.GGA.A.GCGTGCTGGGCCCATAACCCAGAG...........GtCCGAGGATCGAAACCTTGCTCTGCTA... chr2R.trna65-MetCAT Sc: 70.82 AGCAGAGTGGCGCAGT.GGA.A.GCGTGCTGGGCCCATAACCCAGAG...........GtCCGAGGATCGAAACCTTGCTCTGCTA... chr2R.trna37-MetCAT Sc: 70.82 AGCAGAGTGGCGCAGT.GGA.A.GCGTGCTGGGCCCATAACTCAGAG...........GtCCGAGGATCGAAACCTTGCTCTGCTA... chr2R.trna13-MetCAT Sc: 66.24 >>>>>>>..>>>>..........<<<<.>>>>.........<<<<................>>>>>.......<<<<<<<<<<<<.... AGCAGAGTGGCGCAGT.GGA.A.GCGTGCTGGTCCCATAACCCAGAG...........GtCCGAGGATCGAAACCTTGCTCTGCTA... DM9240_CAT_DROSOPHILA_MELANO >>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... AGCAGAGTGGCGCAGT.GGA.A.GCGTGCTGGGCCCATAACCCAGAG...........GtCCGAGGATCGAAACCTTGCTCTGCTA... DX9240_CAT_DROSOPHILA_MELANO AGCAGAGTGGCGCAGT.GGA.A.GCGTGCTGGGCCCATAACCCAGAG...........GtCCGAGGATCGAAACCTTGCTCTGCTAcca RX9240_CAT_DROSOPHILA_MELANO

Phe tRNAs

>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAG...........GtCCCCGGTTCAATCCCGGGTTTCGGCA... chrX.trna4-PheGAA Sc: 82.98 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAG...........GtCCCCGGTTCAATCCCGGGTTTCGGCA... chrX.trna25-PheGAA Sc: 82.98 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAG...........GtCCCCGGTTCAATCCCGGGTTTCGGCA... chr3R.trna60-PheGAA Sc: 82.98 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAG...........GtCCCCGGTTCAATCCCGGGTTTCGGCA... chr3R.trna12-PheGAA Sc: 82.98 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAG...........GtCCCCGGTTCAATCCCGGGTTTCGGCA... chr3R.trna11-PheGAA Sc: 82.98 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAG...........GtCCCCGGTTCAATCCCGGGTTTCGGCA... chr2R.trna69-PheGAA Sc: 82.98 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAG...........GtCCCCGGTTCAATCCCGGGTTTCGGCA... chr2R.trna30-PheGAA Sc: 82.98 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAG...........GtCCCCGGTTCAATCCCGGGTTTCGGCA... chr2L.trna14-PheGAA Sc: 82.98 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAG...........GtCCCCGGTTCAATCCCGGGTTTCGGCA... DF9240_GAA_DROSOPHILA_MELANO GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAG...........GtCCCCGGTTCAATCCCGGGTTTCGGCAcca RF9240_GAA_DROSOPHILA_MELANO

Pro tRNAs

>>>>>>>..>>>..........<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<. GGCTCGTTGGTCTAGGGGTA.TGATTTCCGCTTAGGGTGCGGGAG...........GtCCCGGGTTCAAATCCCGGACGAGCCC chr3L.trna24-ProAGG Sc: 72.31 GGCTCGTTGGTCTAGGGGTA.TGATTTCCGCTTAGGGTGCGGGAG...........GtCCCGGGTTCAAATCCCGGACGAGCCC chr3L.trna23-ProAGG Sc: 72.31 GGCTCGTTGGTCTAGGGGTA.TGATTTCCGCTTAGGGTGCGGGAG...........GtCCCGGGTTCAAATCCCGGACGAGCCC chr3L.trna22-ProAGG Sc: 72.31 GGCTCGTTGGTCTAGGGGTA.TGATTTCCGCTTAGGGTGCGGGAG...........GtCCCGGGTTCAAATCCCGGACGAGCCC chr2L.trna23-ProAGG Sc: 72.31 GGCTCGTTGGTCTAGGGGTA.TGATTTCCGCTTAGGGTGCGGGAG...........GtCCCGGGTTCAAATCCCGGACGAGCCC chr2L.trna21-ProAGG Sc: 72.31 GGCTCGTTGGTCTAGGGGTA.TGATTTCCGCTTAGGGTGCGGGAG...........GtCCCGGGTTCAAATCCCGGACGAGCCC chr2L.trna20-ProAGG Sc: 72.31 GGCTCGTTGGTCTAGGGGTA.TGATTTCCGCTTAGGGTGCGGGAG...........GtCCCGGGTTCAAATCCCGGACGAGCCC chr2L.trna18-ProAGG Sc: 72.31 >>>>>>>..>>>..........<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<. GGCTCGTTGGTCTAGGGGTA.TGATTCTCGCTTCGGGTGCGAGAG...........GtCCCGGGTTCAAATCCCGGACGAGCCC chrX.trna15-ProCGG Sc: 76.52 GGCTCGTTGGTCTAGAGGTA.TGATTCTCGCTTCGGGTGCGAGAG...........GtCCCGGGTTCAATTCCCGGACGAGCCC chrX.trna14-ProCGG Sc: 75.20 GGCTCGTTGGTCTAGAGGTA.TGATTCTCGCTTCGGGTGCGAGAG...........GtCCCGGGTTCAATTCCCGGACGAGCCC chr3L.trna35-ProCGG Sc: 75.20 GGCTCGTTGGTCTAGAGGTA.TGATTCTCGCTTCGGGTGCGAGAG...........GtCCCGGGTTCAATTCCCGGACGAGCCC chr3L.trna31-ProCGG Sc: 75.20 GGCTCGTTGGTCTAGGGGTA.TGATTTTCGCTTCGGGTGCGAGAG...........GtCCCGGGTTCAATTCCCGGACGAGCCC chrX.trna2-ProCGG Sc: 72.94 >>>>>>>..>>>..........<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<. GGCTCAATGGTCTAGGGGTA.TGATTCTCGCTTTGGGTGCGAGAG...........GtCCCGGGTTCAAATCCCGGTTGAGCCC chr3R.trna57-ProTGG Sc: 75.74 GGCTCAATGGTCTAGGGGTA.TGATTCTCGCTTTGGGTGCGAGAG...........GtCCCGGGTTCAAATCCCGGTTGAGCCC chr3R.trna48-ProTGG Sc: 75.74 GGCTCAATGGTCTAGGGGTA.TGATTCTCGCTTTGGGTGCGAGAG...........GtCCCGGGTTCAAATCCCGGTTGAGCCC chr3R.trna20-ProTGG Sc: 75.74 GGCTCAATGGTCTAGGGGTA.TGATTCTCGCTTTGGGTGCGAGAG...........GtCCCGGGTTCAAATCCCGGTTGAGCCC chr3R.trna19-ProTGG Sc: 75.74 GGCTCAATGGTCTAGGGGTA.TGATTCTCGCTTTGGGTGCGAGAG...........GtCCCGGGTTCAAATCCCGGTTGAGCCC chr3R.trna17-ProTGG Sc: 75.74 GGCTCAATGGTCTAGGGGTA.TGATTCTCGCTTTGGGTGCGAGAG...........GtCCCGGGTTCAAATCCCGGTTGAGCCC DP9240_TGG_DROSOPHILA_MELANO

SeC tRNAs

>>>>>.>....>>>>.........<<<<.>>>>>.......<<<<<.>.>>........<<.<..>>>>>.......<<<<.<.<.<<<<<. GCCCCACTGaaCTTCGGTGGTcC.GGGGTGCGGACTTCAAATCCGTAGTCGATTT...GCGTCGAAGTGGTTCGATTCCACcT.GGGGGGC. chr2R.trna85-SeC(e)TCA Sc: 56.66 GCCCCACTT..CTTCGGTGGTcC.GGGGTGCGGACTTCAAATCCGTAGTCGATTT...GCGTCGAAGTGGTTCGATTCCAT.T.GGGGGGCG DZ9240_TCA_DROSOPHILA_MELANO

Ser tRNAs

>>>>>>>..>>>...........<<<.>>>>>.......<<<<<.>>>>.......<<<<..>>>>>.......<<<<<.<<<<<<<.... GCAGTCGTGGCCGAGTGGTtA.AGGCGTCTGACTAGAAATCAGATTCCCTCT....GGGAGCGTAGGTTCGAATCCTAC.CGGCTGCG... chrX.trna12-SerAGA Sc: 85.81 GCAGTCGTGGCCGAGCGGTtA.AGGCGTCTGACTAGAAATCAGATTCCCTCT....GGGAGCGTAGGTTCGAATCCTAC.CGACTGCG... chrX.trna23-SerAGA Sc: 84.54 GCAGTCGTGGCCGAGCGGTtA.AGGCGTCTGACTAGAAATCAGATTCCCTCT....GGGAGCGTAGGTTCGAATCCTAC.CGACTGCG... chrX.trna20-SerAGA Sc: 84.54 GCAGTCGTGGCCGAGCGGTtA.AGGCGTCTGACTAGAAATCAGATTCCCTCT....GGGAGCGTAGGTTCGAATCCTAC.CGACTGCG... chr3L.trna19-SerAGA Sc: 84.54 GCAGTCGTGGCCGAGCGGTtA.AGGCGTCTGACTAGAAATCAGATTCCCTCT....GGGAGCGTAGGTTCGAATCCTAC.CGACTGCG... chr2L.trna7-SerAGA Sc: 84.54 GCAGTCGTGGCCGAGCGGTtA.AGGCGTCTGACTAGAAATCAGATTCCCTCT....GGGAGCGTAGGTTCGAATCCTAC.CGACTGCG... chr2L.trna35-SerAGA Sc: 84.54 GCAGTCGTGGCCGAGCGGTtA.AGGCGTCTGACTAGAAATCAGATTCCCTCT....GGGAGCGTAGGTTCGAATCCTAC.CGGCTGCG... chrX.trna24-SerAGA Sc: 83.36 GCAGTCGTGGCCGAGCGGTtA.AGGCGTCTGACTAGAAATCAGATTCCCTCT....GGGAGCGTAGGTTCGAATCCTAC.CGGCTGCG... chrX.trna13-SerAGA Sc: 83.36 GCAGTCGTGGCCGAGCGGTtA.AGGCGTCTGACTAGAAATCAGATTCCCTCT....GGGAGCGTAGGTTCGAATCCTAC.CGACTGCG... DS9240_AGA_DROSOPHILA_MELANO GCAGTCGTGGCCGAGCGGTtA.AGGCGTCTGACTAGAAATCAGATTCCCTCT....GGGAGCGTAGGTTCGAATCCTAC.CGACTGCGcca RS9241_AGA_DROSOPHILA_MELANO >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.>>>>.......<<<<..>>>>>.......<<<<<.<<<<<<<.... GCAGTCGTGGCCGAGTGGTtA.AGGCGTCTGACTCGAAATCAGATTCCCTCT....GGGAGCGTAGGTTCGAATCCTAC.CGGCTGCG... chrX.trna7-SerCGA Sc: 86.41 GCAGTCGTGGCCGAGTGGTtA.AGGCGTCTGACTCGAAATCAGATTCCCTCT....GGGAGCGTAGGTTCGAATCCTAC.CGGCTGCG... chrX.trna6-SerCGA Sc: 86.41 GCAGTCGTGGCCGAGTGGTtA.AGGCGTCTGACTCGAAATCAGATTCCCTCT....GGGAGCGTAGGTTCGAATCCTAC.CGGCTGCG... chrX.trna22-SerCGA Sc: 86.41 GCAGTCGTGGCCGAGTGGTtA.AGGCGTCTGACTCGAAATCAGATTCCCTCT....GGGAGCGTAGGTTCGAATCCTAC.CGGCTGCG... chr2R.trna33-SerCGA Sc: 86.41 GCAGTCGTGGCCGAGTGGTtA.AGGCGTCTGACTCGAAATCAGATTCCCTCT....GGGAGCGTAGGTTCGAATCCTAC.CGGCTGCG... DS9241_CGA_DROSOPHILA_MELANO GCAGTCGTGGCCGAGTGGTtA.AGGCGTCTGACTCGAAATCAGATTCCCTCT....GGGAGCGTAGGTTCGAATCCTAC.CGGCTGCGcca RS9242_CGA_DROSOPHILA_MELANO >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.>>>>.......<<<<..>>>>>.......<<<<<.<<<<<<<.... GCTGCGGTGTCCGAGTGGTtA.AGGAGATGGACTTGAAATCCATTGGGTTCT....ACCCGCACAGGTTCAAGTCCTGT.CCGCAGCG... chr2R.trna53-SerTGA Sc: 79.78 GTTGCGGTGTCCGAGTGGTtA.AGGAGATGGACTTGAAATCCATTGGGTTCT....ACCCGCGCAGGTTCGAATCCTGT.CCGCAGCG... chr2R.trna48-SerTGA Sc: 76.82 >>>>>>>..>>>...........<<<.>>>>>.......<<<<<.>>>>.......<<<<..>>>>>.......<<<<<.<<<<<<<.... GACGAGGTGGCCGAGTGGTtA.AGGCGTTGGACTGCTAATCCAATGTGCTCT....GCACGCGTGGGTTCGAATCCCAT.CCTCGTCG... chr3R.trna44-SerGCT Sc: 87.38 GACGAGGTGGCCGAGAGGTtA.AGGCGTTGGACTGCTAATCCAATGTGCTCT....GCACGCGTGGGTTCGAATCCCAT.CCTCGTCG... chr3R.trna62-SerGCT Sc: 82.84 GACGAGGTGGCCGAGAGGTtA.AGGCGTTGGACTGCTAATCCAATGTGCTCT....GCACGCGTGGGTTCGAATCCCAT.CCTCGTCG... chr3R.trna59-SerGCT Sc: 82.84 GACGAGGTGGCCGAGAGGTtA.AGGCGTTGGACTGCTAATCCAATGTGCTCT....GCACGCGTGGGTTCGAATCCCAT.CCTCGTCG... chr3R.trna45-SerGCT Sc: 82.84 GACGAGGTGGCCGAGAGGTtA.AGGCGTTGGACTGCTAATCCAATGTGCTCT....GCACGCGTGGGTTCGAATCCCAT.CCTCGTCG... chr3R.trna33-SerGCT Sc: 82.84 GACGAGGTGGCCGAGAGGTtA.AGGCGTTGGACTGCTAATCCAATGTGCTCT....GCACGCGTGGGTTCGAATCCCAT.CCTCGTCG... chr3R.trna32-SerGCT Sc: 82.84 GACGAGGTGGCCGAGTGGTtA.AGGCGTTGGACTGCTAATCCAATGTGCTCT....GCACGCGTGGGTTCGAATCCCAT.CCTCGTCGcca RS9240_GCT_DROSOPHILA_MELANO

Sup tRNAs

Thr tRNAs

>>>.>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<.<<<. GGCGCCGTGGCTTAGTTGGTtA.AAGCGCCTGTCTAGTAAACAGGAG...........AtCGTGAGTTCGAATCTCGCCGGGGCCT chrUextra.trna3-ThrAGT Sc: 75.61 GGCGCCGTGGCTTAGTTGGTtA.AAGCGCCTGTCTAGTAAACAGGAG...........AtCGTGAGTTCGAATCTCGCCGGGGCCT chr3R.trna58-ThrAGT Sc: 75.61 GGCGCCGTGGCTTAGTTGGTtA.AAGCGCCTGTCTAGTAAACAGGAG...........AtCGTGAGTTCGAATCTCGCCGGGGCCT chr3R.trna55-ThrAGT Sc: 75.61 GGCGCCGTGGCTTAGTTGGTtA.AAGCGCCTGTCTAGTAAACAGGAG...........AtCGTGAGTTCGAATCTCGCCGGGGCCT chr3R.trna54-ThrAGT Sc: 75.61 GGCGCCGTGGCTTAGTTGGTtA.AAGCGCCTGTCTAGTAAACAGGAG...........AtCGTGAGTTCGAATCTCGCCGGGGCCT chr3R.trna28-ThrAGT Sc: 75.61 GGCGCCGTGGCTTAGTTGGTtA.AAGCGCCTGTCTAGTAAACAGGAG...........AtCGTGAGTTCGAATCTCGCCGGGGCCT chr3R.trna14-ThrAGT Sc: 75.61 GGCGCCGTGGCTTAGTTGGTtA.AAGCGCCTGTCTAGTAAACAGGAG...........AtCGTGAGTTCGAATCTCGCCGGGGCCT chr2R.trna86-ThrAGT Sc: 75.61 GGCGCCGTGGCTTAGTTGGTtA.AAGCGCCTGTCTAGTAAACAGGAG...........AtCGTGAGTTCGAATCTCGCCGGGGCCT chr2L.trna29-ThrAGT Sc: 75.61 GGCGCCGTGGCTTAGTTGGTtA.AAGCGCCTGTCTAGTAAACAGGAG...........AtCGTGAGTTCGAATTTCGCCGGGGCCT chr2R.trna87-ThrAGT Sc: 69.29 >.>.>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>.>>.......<<.<<<<<.<.<. GGCGCCGTGGCTTAGTTGGGcA.AAGCGCCTGTCTAGTAAACAGGAG...........AtCGTAAGTTCGAATCTCATCGGGGGTT chr3L.trna21-ThrAGT Sc: 52.51 Pseudo >>>.>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<.<<<. GGCGCCGTGGCTTAGTTGGTtA.AAGCGCCTGTCTAGTAAACAGGAG...........AtCGTGAGTTCGAATCTCGCCGGGGCCT DT9240_AGT_DROSOPHILA_MELANO >>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<. GCCTCTTTAGCTCAGT.GGT.A.GAGCGTTGGTCTCGTAAACCAAAG...........GcCGTGAGTTCAACCCTCACAGGAGGCA chr3R.trna31-ThrCGT Sc: 77.47 GCCTCTTTAGCTCAGT.GGT.A.GAGCGTTGGTCTCGTAAACCAAAG...........GcCGTGAGTTCAACCCTCACAGGAGGCA chr3R.trna30-ThrCGT Sc: 77.47 GCCTCTTTAGCTCAGT.GGT.A.GAGCGTTGGTCTCGTAAACCAAAG...........GcCGTGAGTTCAACCCTCACAGGAGGCA chr3R.trna29-ThrCGT Sc: 77.47 >>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<. GCCTCTTTAGCTCAGT.GGC.A.GAGCACTGGTCTTGTAAACCAGGG...........GtCGTGAGTTCAATCCTCACAGGAGGCA chr3R.trna61-ThrTGT Sc: 76.08 GCCTCTTTAGCTCAGT.GGC.A.GAGCACTGGTCTTGTAAACCAGGG...........GtCGTGAGTTCAATCCTCACAGGAGGCA chr2R.trna84-ThrTGT Sc: 76.08 GCCTCTTTAGCTCAGT.GGC.A.GAGCACTGGTCTTGTAAACCAGGG...........GtCGTGAGTTCAATCCTCACAGGAGGCA chr2R.trna83-ThrTGT Sc: 76.08 GCCTCTTTAGCTCAGT.GGC.A.GAGCACTGGTCTTGTAAACCAGGG...........GtCGTGAGTTCAATCCTCACAGGAGGCA chr2R.trna15-ThrTGT Sc: 76.08 GCCTCTTTAGCTCAGT.GGC.A.GAGCACTGGTCTTGTAAACCAGGG...........GtCGTGAGTTCAATCCTCACAGGAGGCA chr2R.trna14-ThrTGT Sc: 76.08 GCCTCTTTAGCTCAGT.GGC.A.GAGCACTGGTCTTGTAAACCAGGG...........GcCGTGAGTTCAATTCTCACAAGAGGCA chr3R.trna10-ThrTGT Sc: 74.00

Trp tRNAs

>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<. GACTCCGTGGCGCAACGGTA.GCGCGTCCGACTCCAGATCGGAAG...........GtTGCGTGTTCAAATCACGTCGGGGTCA chr2R.trna58-TrpCCA Sc: 75.61 GACTCCGTGGCGCAACGGTA.GCGCGTCCGACTCCAGATCGGAAG...........GtTGCGTGTTCAAATCACGTCGGGGTCA chr2R.trna56-TrpCCA Sc: 75.61 GACTCCGTGGCGCAACGGTA.GCGCGTCCGACTCCAGATCGGAAG...........GtTGCGTGTTCAAATCACGTCGGGGTCA chr2R.trna46-TrpCCA Sc: 75.61 GACTCCGTGGCGCAACGGTA.GCGCGTCCGACTCCAGATCGGAAG...........GtTGCGTGTTCAAATCACGTCGGGGTCA chr2R.trna45-TrpCCA Sc: 75.61 GACTCCGTGGCGCAACGGTA.GCGCGTCCGACTCCAGATCGGAAG...........GtTGCGTGTTCAAATCACGTCGGGGTCA chr2R.trna31-TrpCCA Sc: 75.61 GACTCCGTGGCGCAACGGTA.GCGCGTCCGACTCCAGATCGGAAG...........GtTGCGTGTTCAAATCACGTCGGGGTCA chr2L.trna34-TrpCCA Sc: 75.61 GACTCCGTGGCGCAACGGTA.GCGCGTCTGACTCCAGATCAGAAG...........GtTGCGTGTTCAAATCACGTCGGGGTCA chr2R.trna59-TrpCCA Sc: 75.41 GACTCCGTGGCGCAACGGTA.GCGCGTCTGACTCCAGATCAGAAG...........GtTGCGTGTTCAAATCACGTCGGGGTCA chr2R.trna44-TrpCCA Sc: 75.41

Tyr tRNAs

>>>>>>>..>>>>........<<<<.>>>>>.......................................................<<<<<................>>>>>.......<<<<<<<<<<<<.... CCTTCGATAGCTCAGTTGGTAGAGCGGTGGACTGTAGttggaaaattatgcaatagaa...........................ATCCATAG...........GtCGCTGGTTCAAATCCGGCTCGAAGGA... chr3R.trna64-TyrGTA Sc: 79.90 CCTTCGATAGCTCAGTTGGTAGAGCGGTGGACTGTAGttggaaaaacatgcaatagaa...........................ATCCATAG...........GtCGCTGGTTCAAATCCGGCTCGAAGGA... chr3R.trna63-TyrGTA Sc: 79.41 CCTTCGATAGCTCAGTTGGTAGAGCGGTGGACTGTAGttggaaaacaagcaatagaa............................ATCCATAG...........GtCGCTGGTTCAAATCCGGCTCGAAGGA... chr3R.trna66-TyrGTA Sc: 79.28 CCTTCGATAGCTCAGTTGGTAGAGCGGTGGACTGTAGttggaaaacatgcaatagaa............................ATCCATAG...........GtCGCTGGTTCAAATCCGGCTCGAAGGA... chr3R.trna65-TyrGTA Sc: 79.14 CCTTCGATAGCTCAGTTGGTAGAGCGGTGGACTGTAGttggcaaacaagcaatagaa............................ATCCATAG...........GtCGCTGGTTCAAATCCGGCTCGAAGGA... chr3R.trna67-TyrGTA Sc: 78.51 CCTTCGATAGCTCAGTTGGTAGAGCGGTGGACTGTAGattgggattacgaatgtagac...........................ATCCATAG...........GtCGCTGGTTCAAATCCGGCTCGAAGGA... chr2L.trna6-TyrGTA Sc: 77.84 CCTTCGATAGCTCAGTTGGTAGAGCGGTGGACTGTAGatggtaaatcgcaatggcagag..........................ATCCATAG...........GtCGCTGGTTCAAATCCGGCTCGAAGGA... chrX.trna18-TyrGTA Sc: 76.98 CCTTCGATAGCTCAGTTGGTAGAGCGGTGGACTGTAGacggtttcatattgaatgcagaatacagagcagag.............ATCCATAG...........GtCGCTGGTTCAAGTCCGGCTCGAAGGA... chrX.trna17-TyrGTA Sc: 75.42 CCTTCGATAGCTCAGTTGGTAGAGCGGTGGACTGTAGaagttttcagatctgatcacactttccaggtgatcgaatccagcaggcATCCATAG...........GtCGCTGGTTCAAATCCGGCTCGAAGGA... chr2L.trna36-TyrGTA Sc: 73.79 CCTTCGATAGCTCAGTTGGTAGAGCGGTGGACTGTAG................................................ATCCATAG...........GtCGCTGGTTCAAATCCGGCTCGAAGGA... DY9240_GTA_DROSOPHILA_MELANO CCTTCGATAGCTCAGTTGGTAGAGCGGTGGACTGTAG................................................ATCCATAG...........GtCGCTGGTTCAAATCCGGCTCGAAGGAcca RY9240_GTA_DROSOPHILA_MELANO

Val tRNAs

>>>>>>>..>>>...........<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GTTTCCGTGGTGTAGTGGTtA.TCACATCCGCCTAACACGCGGAAG...........GcCCCCGGTTCAATCCCGGGCGGAAACA... chr3R.trna53-ValAAC Sc: 80.36 GTTTCCGTGGTGTAGTGGTtA.TCACATCCGCCTAACACGCGGAAG...........GcCCCCGGTTCAATCCCGGGCGGAAACA... chr3R.trna13-ValAAC Sc: 80.36 GTTTCCGTGGTGTAGCGGTtA.TCACATCTGCCTAACACGCAGAAG...........GcCCCCGGTTCGATCCCGGGCGGAAACA... chr3L.trna37-ValAAC Sc: 79.44 GTTTCCGTGGTGTAGCGGTtA.TCACATCTGCCTAACACGCAGAAG...........GcCCCCGGTTCGATCCCGGGCGGAAACA... chr3L.trna27-ValAAC Sc: 79.44 GTTTCCGTGGTGTAGCGGTtA.TCACATCTGCCTAACACGCAGAAG...........GcCCCCGGTTCGATCCCGGGCGGAAACA... chr2R.trna35-ValAAC Sc: 79.44 GTTTCCGTGGTGTAGCGGTtA.TCACATCTGCCTAACACGCAGAAG...........GcCCCCGGTTCGATCCCGGGCGGAAACA... chr2R.trna34-ValAAC Sc: 79.44 GTTTCCGTGGTGTAGTGGTtA.TCACATCCGCCTAACACGCGGAAG...........GcCCCCGGTTCAATCCCGGGCGGAAACA... DV9240_AAC_DROSOPHILA_MELANO GTTTCCGTGGTGTAGCGGTtA.TCACATCTGCCTAACACGCAGAAG...........GcCCCCGGTTCGATCCCGGGCGGAAACAcca RV9240_AAC_DROSOPHILA_MELANO >>>>>>>..>>>...........<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GTTTTCGTAGTGTAGTGGTtA.TCACGTGTGCTTCACACGCACAAG...........GtCCCCGGTTCGAACCCGGGCGAAAACA... chr3R.trna15-ValCAC Sc: 83.37 GTTTCCGTAGTGTAGCGGTtA.TCACGTGTGCTTCACACGCACAAG...........GtCCCCGGTTCGAACCCGGGCGGGAACA... chr3R.trna75-ValCAC Sc: 81.63 GTTTCCGTAGTGTAGCGGTtA.TCACGTGTGCTTCACACGCACAAG...........GtCCCCGGTTCGAACCCGGGCGGGAACA... chr3R.trna74-ValCAC Sc: 81.63 GTTTCCGTAGTGTAGCGGTtA.TCACGTGTGCTTCACACGCACAAG...........GtCCCCGGTTCGAACCCGGGCGGGAACA... chr3R.trna6-ValCAC Sc: 81.63 GTTTCCGTAGTGTAGCGGTtA.TCACGTGTGCTTCACACGCACAAG...........GtCCCCGGTTCGAACCCGGGCGGGAACA... chr3R.trna5-ValCAC Sc: 81.63 GTTTCCGTAGTGTAGCGGTtA.TCACGTGTGCTTCACACGCACAAG...........GtCCCCGGTTCGAACCCGGGCGGGAACA... chr3R.trna47-ValCAC Sc: 81.63 GTTTCCGTAGTGTAGCGGTtA.TCACGTGTGCTTCACACGCACAAG...........GtCCCCGGTTCGAACCCGGGCGGGAACA... chr3R.trna26-ValCAC Sc: 81.63 GTTTTCGTAGTGTAGTGGTtA.TCACGTGTGCTTCACACGCACAAG...........GtCCCCGGTTCGAACCCGGGCGAAAACA... DV9241_CAC_DROSOPHILA_MELANO GTTTCCGTAGTGTAGCGGTtA.TCACGTGTGCTTCACACGCACAAG...........GtCCCCGGTTCGAACCCGGGCGGGAACAcca RV9241_CAC_DROSOPHILA_MELANO >>>>>>>..>>>...........<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGTTCCATAGTGTAGCGGTtA.TCACGTCTGCTTTACACGCAGAAG...........GtCTCCGGTTCGATCCCGGATGGAACCA... chr3L.trna46-ValTAC Sc: 79.18 GGTTCCATAGTGTAGCGGTtA.TCACGTCTGCTTTACACGCAGAAG...........GtCTCCGGTTCGATCCCGGATGGAACCA... chr3L.trna20-ValTAC Sc: 79.18 GGTTCCATAGTGTAGCGGTnA.TCACGTCTGCTTNACACGCAGAAG...........GtCTCCGGTTCGATCCCGGATGGAACCAcca RV9242_NAC_DROSOPHILA_MELANO >>>>>>>..>>>...........<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... RV9242_NAC_DROSOPHILA_MELANO

The Genomic tRNA Database is curated by Todd Lowe and Patricia Chan. Please email lowe@soe.ucsc.edu with any questions and comments. To submit corrections, please use our Bug and Request Tracking System.