GtRNAdb

tRNAscan-SE Analysis of Eremothecium gossypii

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tRNA Gene Summary





tRNAs Decoding Standard 20 AA202
Selenocysteine tRNAs (TCA)1
Possible suppressor tRNAs (CTA,TTA)0
tRNAs with undetermined
or unknown isotypes
0
Predicted pseudogenes8
Total tRNAs211


Intron Summary

tRNAs with introns
52
Pro
TGG
7
Ser
CGA
3
Ser
GCT
3
Arg
ACG
4
Leu
CAG
1
Leu
TAG
4
Leu
CAA
7
Phe
GAA
6
Lys
TTT
3
Gln
CTG
4
Ile
TAT
1
Tyr
GTA
4
Trp
CCA
5


Four Box tRNA Sets

IsotypetRNA Count by AnticodonTotal
AlaAGC
7
GGC
 
CGC
2
TGC
5
14
GlyACC
 
GCC
11
CCC
2
TCC
2
15
ProAGG
1
GGG
 
CGG
 
TGG
7
8
ThrAGT
7
GGT
 
CGT
2
TGT
3
12
ValAAC
8
GAC
 
CAC
4
TAC
3
15

Six Box tRNA Sets

IsotypetRNA Count by AnticodonTotal
SerAGA
7
GGA
 
CGA
3
TGA
3
ACT
 
GCT
3
 
 
 
 
16
ArgACG
4
GCG
 
CCG
2
TCG
 
 
 
 
 
CCT
1
TCT
7
14
LeuAAG
 
GAG
1
CAG
 
TAG
4
 
 
 
 
CAA
7
TAA
3
15

Two Box tRNA Sets

IsotypetRNA Count by AnticodonTotal
PheAAA
 
GAA
7
 
 
 
 
7
AsnATT
 
GTT
7
 
 
 
 
7
Lys 
 
 
 
CTT
9
TTT
4
13
AspATC
 
GTC
10
 
 
 
 
10
Glu 
 
 
 
CTC
8
TTC
3
11
HisATG
 
GTG
5
 
 
 
 
5
Gln 
 
 
 
CTG
4
TTG
4
8

Two Box & Other tRNA Sets

IsotypetRNA Count by AnticodonTotal
IleAAT
9
GAT
 
 
 
TAT
1
10
Met 
 
 
 
CAT
10
 
 
10
TyrATA
 
GTA
4
 
 
 
 
4
Supres 
 
 
 
CTA
 
TTA
 
0
CysACA
 
GCA
3
 
 
 
 
3
Trp 
 
 
 
CCA
5
 
 
5
SelCys 
 
 
 
 
 
TCA
1
1

The Genomic tRNA Database is curated by Todd Lowe and Patricia Chan. Please email lowe@soe.ucsc.edu with any questions and comments. To submit corrections, please use our Bug and Request Tracking System.