GtRNAdb

tRNAscan-SE Analysis of Escherichia coli SECEC SMS 3 5

>> Main Overview
>> tRNAs by Isotype
>> tRNAs by Locus
>> Secondary Structures
>> tRNA Alignments
>> FASTA Seqs
>> Run Options/Stats
>> Analysis Notes
>> Modomics tRNA Modifications
>> Genome DB
>> Genome Seq
Structurally Aligned tRNAs (by Isotype & Anticodon)

Structural alignments are generated by aligning tRNA sequences against domain-specific tRNA covariance models with the use of COVE.


[Ala] [Arg] [Asn] [Asp] [Cys] [Gln] [Glu] [Gly] [His] [Ile] [Leu] [Lys] [Met] [Phe] [Pro] [Ser] [Thr] [Trp] [Tyr] [Val]
[Suppressor] [Selenocysteine]


Ala tRNAs

>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGGCTATAGCTCAGCTGGGAGAGCGCTTGCATGGCATGCAAGAG...........GtCAGCGGTTCGATCCCGCTTAGCTCCACCA chr.trna78-AlaGGC Sc: 86.51 GGGGCTATAGCTCAGCTGGGAGAGCGCTTGCATGGCATGCAAGAG...........GtCAGCGGTTCGATCCCGCTTAGCTCCACCA chr.trna77-AlaGGC Sc: 86.51 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGGCTATAGCTCAGCTGGGAGAGCGCCTGCTTTGCACGCAGGAG...........GtCTGCGGTTCGATCCCGCATAGCTCCACCA chr.trna65-AlaTGC Sc: 88.77 GGGGCTATAGCTCAGCTGGGAGAGCGCCTGCTTTGCACGCAGGAG...........GtCTGCGGTTCGATCCCGCATAGCTCCACCA chr.trna2-AlaTGC Sc: 88.77

Arg tRNAs

>>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<.<<<<<<<.... GCATCCGTAGCTCAGCTGGAtA.GAGTACTCGGCTACGAACCGAGCG...........GtCGGAGGTTCGAATCCTCC.CGGATGCACCA chr.trna74-ArgACG Sc: 87.22 GCATCCGTAGCTCAGCTGGAtA.GAGTACTCGGCTACGAACCGAGCG...........GtCGGAGGTTCGAATCCTCC.CGGATGCACCA chr.trna73-ArgACG Sc: 87.22 GCATCCGTAGCTCAGCTGGAtA.GAGTACTCGGCTACGAACCGAGCG...........GtCGGAGGTTCGAATCCTCC.CGGATGCACCA chr.trna72-ArgACG Sc: 87.22 GCATCCGTAGCTCAGCTGGAtA.GAGTACTCGGCTACGAACCGAGCG...........GtCGGAGGTTCGAATCCTCC.CGGATGCACCA chr.trna71-ArgACG Sc: 87.22 >>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<.................>>>>.......<<<<..<<<<<<<.... GCGCCCGTAGCTCAGCTGGAtA.GAGCGCTGCCCTCCGGAGGCAGAG...........GtCTCAGGTTCGAATCCTGT.CGGGCGCGCCA chr.trna44-ArgCCG Sc: 89.49 >>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<.<<<<<<<.... GTCCTCTTAGTTAAAT.GGAtA.TAACGAGCCCCTCCTAAGGGCTA............AtTGCAGGTTCGATTCCTGC.AGGGGACACCA chr.trna30-ArgCCT Sc: 66.39 >>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<.<<<<<<<.... GCGCCCTTAGCTCAGTTGGAtA.GAGCAACGACCTTCTAAGTCGTGG...........GcCGCAGGTTCGAATCCTGC.AGGGCGCGCCA chr.trna7-ArgTCT Sc: 89.39

Asn tRNAs

>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... TCCTCTGTAGTTCAGTCGGTAGAACGGCGGACTGTTAATCCGTAT...........GtCACTGGTTCGAGTCCAGTCAGAGGAGCCA chr.trna83-AsnGTT Sc: 87.13 TCCTCTGTAGTTCAGTCGGTAGAACGGCGGACTGTTAATCCGTAT...........GtCACTGGTTCGAGTCCAGTCAGAGGAGCCA chr.trna82-AsnGTT Sc: 87.13 TCCTCTGTAGTTCAGTCGGTAGAACGGCGGACTGTTAATCCGTAT...........GtCACTGGTTCGAGTCCAGTCAGAGGAGCCA chr.trna81-AsnGTT Sc: 87.13 TCCTCTGTAGTTCAGTCGGTAGAACGGCGGACTGTTAATCCGTAT...........GtCACTGGTTCGAGTCCAGTCAGAGGAGCCA chr.trna15-AsnGTT Sc: 87.13

Asp tRNAs

>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGAGCGGTAGTTCAGTCGGTtAGAATACCTGCCTGTCACGCAGGGG...........GtCGCGGGTTCGAGTCCCGTCCGTTCCGCCA chr.trna42-AspGTC Sc: 90.74 GGAGCGGTAGTTCAGTCGGTtAGAATACCTGCCTGTCACGCAGGGG...........GtCGCGGGTTCGAGTCCCGTCCGTTCCGCCA chr.trna4-AspGTC Sc: 90.74 GGAGCGGTAGTTCAGTCGGTtAGAATACCTGCCTGTCACGCAGGGG...........GtCGCGGGTTCGAGTCCCGTCCGTTCCGCCA chr.trna3-AspGTC Sc: 90.74

Cys tRNAs

>>>>>>>..>>>..........<<<.>>>>>.......<<<<<...............>>>>>.......<<<<<<<<<<<<.... GGCGCGTTAACAAAGCGGTT.ATGTAGCGGATTGCAAATCCGTCT...........AGTCCGGTTCGACTCCGGAACGCGCCTCCA chr.trna22-CysGCA Sc: 51.48

Gln tRNAs

>>>>>>>..>>>..........<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... TGGGGTATCGCCAAGCGGTA.AGGCACCGGATTCTGATTCCGGCA...........TtCCGAGGTTCGAATCCTCGTACCCCAGCCA chr.trna90-GlnCTG Sc: 75.83 TGGGGTATCGCCAAGCGGTA.AGGCACCGGATTCTGATTCCGGCA...........TtCCGAGGTTCGAATCCTCGTACCCCAGCCA chr.trna89-GlnCTG Sc: 75.83 >>>>>>>..>>>..........<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... TGGGGTATCGCCAAGCGGTA.AGGCACCGGTTTTTGATACCGGCA...........TtCCCTGGTTCGAATCCAGGTACCCCAGCCA chr.trna87-GlnTTG Sc: 74.33 TGGGGTATCGCCAAGCGGTA.AGGCACCGGTTTTTGATACCGGCA...........TtCCCTGGTTCGAATCCAGGTACCCCAGCCA chr.trna86-GlnTTG Sc: 74.33

Glu tRNAs

>>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<...............>>>>>.......<<<<<<<<<<<<.... GTCCCCTTCGTCTAGAGGCccA.GGACACCGCCCTTTCACGGCGGTA...........ACAGGGGTTCGAATCCCCTAGGGGACGCCA chr.trna76-GluTTC Sc: 59.80 GTCCCCTTCGTCTAGAGGCccA.GGACACCGCCCTTTCACGGCGGTA...........ACAGGGGTTCGAATCCCCTAGGGGACGCCA chr.trna54-GluTTC Sc: 59.80 GTCCCCTTCGTCTAGAGGCccA.GGACACCGCCCTTTCACGGCGGTA...........ACAGGGGTTCGAATCCCCTAGGGGACGCCA chr.trna49-GluTTC Sc: 59.80 GTCCCCTTCGTCTAGAGGCccA.GGACACCGCCCTTTCACGGCGGTA...........ACAGGGGTTCGAATCCCCTAGGGGACGCCA chr.trna48-GluTTC Sc: 59.80 GTCCCCTTCGTCTAGAGGCccA.GGACACCGCCCTTTCACGGCGGTA...........ACAGGGGTTCGAATCCCCTAGGGGACGCCA chr.trna41-GluTTC Sc: 59.80

Gly tRNAs

>>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCGGGAATAGCTCAGTTGGT.A.GAGCACGACCTTGCCAAGGTCGGG...........GtCGCGAGTTCGAGTCTCGTTTCCCGCTCCA chr.trna57-GlyGCC Sc: 93.74 GCGGGAATAGCTCAGTTGGT.A.GAGCACGACCTTGCCAAGGTCGGG...........GtCGCGAGTTCGAGTCTCGTTTCCCGCTCCA chr.trna56-GlyGCC Sc: 93.74 GCGGGAATAGCTCAGTTGGT.A.GAGCACGACCTTGCCAAGGTCGGG...........GtCGCGAGTTCGAGTCTCGTTTCCCGCTCCA chr.trna55-GlyGCC Sc: 93.74 GCGGGAATAGCTCAGTTGGT.A.GAGCACGACCTTGCCAAGGTCGGG...........GtCGCGAGTTCGAGTCTCGTTTCCCGCTCCA chr.trna21-GlyGCC Sc: 93.74 >>>>>>>..>>>>..........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCGGGCGTAGTTCAAT.GGT.A.GAACGAGAGCTTCCCAAGCTCTAT...........A.CGAGGGTTCGATTCCCTTCGCCCGCTCCA chr.trna69-GlyCCC Sc: 78.75 >>>>>>>..>>>............<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCGGGCATCGTATAAT.GGCtA.TTACCTCAGCCTTCCAAGCTGATG...........A.TGCGGGTTCGATTCCCGCTGCCCGCTCCA chr.trna52-GlyTCC Sc: 64.85 GCGGGCATCGTATAAT.GGCtA.TTACCTCAGCCTTCCAAGCTGATG...........A.TGCGGGTTCGATTCCCGCTGCCCGCTCCA chr.trna20-GlyTCC Sc: 64.85

His tRNAs

>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GTGGCTATAGCTCAGTTGGTAGAGCCCTGGATTGTGATTCCAGTT...........GtCGTGGGTTCGAATCCCATTAGCCACCCCA chr.trna45-HisGTG Sc: 84.86

Ile tRNAs

>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... AGGCTTGTAGCTCAGGTGGTtAGAGCGCACCCCTGATAAGGGTGAG...........GtCGGTGGTTCAAGTCCACTCAGGCCTACCA chr.trna64-IleGAT Sc: 88.37 AGGCTTGTAGCTCAGGTGGTtAGAGCGCACCCCTGATAAGGGTGAG...........GtCGGTGGTTCAAGTCCACTCAGGCCTACCA chr.trna1-IleGAT Sc: 88.37

Leu tRNAs

>>>>>>>..>>>...........<<<.>>>>>.......<<<<<..>>>.>.........<.<<<...>>>>>.......<<<<<.<<<<<<<.... GCCGAGGTGGTGGAATTGGTaGACACGCTACCTTGAGGTGGTAGTGCCCAA.........TAGGGCtTACGGGTTCAAGTCCCGT.CCTCGGTACCA chr.trna67-LeuGAG Sc: 70.30 >>>>.>>..>>>...........<<<.>>>>>.......<<<<<..>>>>...........<<<<...>>>>>.......<<<<<.<<.<<<<.... GCGAAGGTGGCGGAATTGGTaGACGCGCTAGCTTCAGGTGTTAGT.GTCC.TTAC......GGACG.TGGGGGTTCAAGTCCCCC.CCCTCGCACCA chr.trna61-LeuCAG Sc: 69.07 GCGAAGGTGGCGGAATTGGTaGACGCGCTAGCTTCAGGTGTTAGT.GTCC.TTAC......GGACG.TGGGGGTTCAAGTCCCCC.CCCTCGCACCA chr.trna59-LeuCAG Sc: 69.07 GCGAAGGTGGCGGAATTGGTaGACGCGCTAGCTTCAGGTGTTAGT.GTCC.TTAC......GGACG.TGGGGGTTCAAGTCCCCC.CCCTCGCACCA chr.trna46-LeuCAG Sc: 69.07 GCGAAGGTGGCGGAATTGGTaGACGCGCTAGCTTCAGGTGTTAGT.GTTC.TTAC......GGACG.TGGGGGTTCAAGTCCCCC.CCCTCGCACCA chr.trna60-LeuCAG Sc: 66.59 >>>>>>>..>>>...........<<<.>>>>>.......<<<<<..>>>.............<<<...>>>>>.......<<<<<.<<<<<<<.... GCGGGAGTGGCGAAATTGGTaGACGCACCAGATTTAGGTTCTGGC.GCC..GCAA.......GGTG.TGCGAGTTCAAGTCTCGC.CTCCCGCACCA chr.trna85-LeuTAG Sc: 78.30 >>>>>>>..>>>...........<<<.>>>>>.......<<<<<..>>>.............<<<...>>>>>.......<<<<<.<<<<<<<.... GCCGAAGTGGCGAAATCGGTaGACGCAGTTGATTCAAAATCAACC.GTA..GAAA.......TACG.TGCCGGTTCGAGTCCGGC.CTTCGGCACCA chr.trna58-LeuCAA Sc: 79.12 >>>>>>>..>>>...........<<<.>>>>>.......<<<<<..>>>>...........<<<<...>>>>>.......<<<<<.<<<<<<<.... GCCCGGATGGTGGAATCGGTaGACACAAGGGATTTAAAATCCCTC.GGCG.TTCG......CGCTG.TGCGGGTTCAAGTCCCGC.TCCGGGTACCA chr.trna23-LeuTAA Sc: 71.59

Lys tRNAs

>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGTCGTTAGCTCAGTTGGT.AGAGCAGTTGACTTTTAATCAATTG...........GtCGCAGGTTCGAATCCTGCACGACCCACCA chr.trna8-LysTTT Sc: 99.54 GGGTCGTTAGCTCAGTTGGT.AGAGCAGTTGACTTTTAATCAATTG...........GtCGCAGGTTCGAATCCTGCACGACCCACCA chr.trna34-LysTTT Sc: 99.54 GGGTCGTTAGCTCAGTTGGT.AGAGCAGTTGACTTTTAATCAATTG...........GtCGCAGGTTCGAATCCTGCACGACCCACCA chr.trna14-LysTTT Sc: 99.54 GGGTCGTTAGCTCAGTTGGT.AGAGCAGTTGACTTTTAATCAATTG...........GtCGCAGGTTCGAATCCTGCACGACCCACCA chr.trna13-LysTTT Sc: 99.54 GGGTCGTTAGCTCAGTTGGT.AGAGCAGTTGACTTTTAATCAATTG...........GtCGCAGGTTCGAATCCTGCACGACCCACCA chr.trna12-LysTTT Sc: 99.54 GGGTCGTTAGCTCAGTTGGT.AGAGCAGTTGACTTTTAATCAATTG...........GtCGCAGGTTCGAATCCTGCACGACCCACCA chr.trna10-LysTTT Sc: 99.54 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>.>>.......<<.<<<<<<<<<.... CCGCCACTAGCTCATCAGGAaAGAGCGTCAACCCTTTAAGTTGAGT...........GtGCGAGGTTCGAGTCCCCGGTGGCGGTCCA chr.trna18-LysTTT Sc: 49.26

Met tRNAs

>>>>>>>..>>>>...........<<<<.>>>>>.......<<<<<................>>.>>.......<<.<<<<<<<<<.... GGCTACGTAGCTCAGTT.GGTtA.GAGCACATCACTCATAATGATGGG...........GtCACAGGTTCGAATCCCGTCGTAGCCACCA chr.trna88-MetCAT Sc: 96.18 GGCTACGTAGCTCAGTT.GGTtA.GAGCACATCACTCATAATGATGGG...........GtCACAGGTTCGAATCCCGTCGTAGCCACCA chr.trna84-MetCAT Sc: 96.18 >>>>>>>..>>>>...........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGCCCCTTAGCTCAGT..GGTtA.GAGCAGGCGACTCATAATCGCTTG...........GtCGCTGGTTCAAGTCCAGCAGGGGCCACCA chr.trna39-MetCAT Sc: 93.86 GGCCCTTTAGCTCAGT..GGTtA.GAGCAGGCGACTCATAATCGCCTG...........GtCGCTGGTTCAAGTCCAGCAGGGGCCACCA chr.trna75-MetCAT Sc: 92.29 >>>>>>>..>>>>...........<<<<..>>>>.......<<<<.................>>>>>.......<<<<<<<<<<<<.... GGCCCTTTAGCTCAGT..GGTgA.GAGCGAGCGACTCATAATCGCCAG...........GtCGCTGGTTCAAATCCAGCAAGGGCCACCA chr.trna17-MetCAT Sc: 88.46 .>>>>>>..>>>>...........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<..... CGCGGGGTGGAGCAGCCtGGT.A.GCTCGTCGGGCTCATAACCCGAAG...........GtCGTCGGTTCAAATCCGGCCCCCGCAACCA chr.trna68-MetCAT Sc: 86.07 CGCGGGGTGGAGCAGCCtGGT.A.GCTCGTCGGGCTCATAACCCGAAG...........GtCGTCGGTTCAAATCCGGCCCCCGCAACCA chr.trna37-MetCAT Sc: 86.07 CGCGGGGTGGAGCAGCCtGGT.A.GCTCGTCGGGCTCATAACCCGAAG...........GtCGTCGGTTCAAATCCGGCCCCCGCAACCA chr.trna36-MetCAT Sc: 86.07 CGCGGGGTGGAGCAGCCtGGT.A.GCTCGTCGGGCTCATAACCCGAAG...........GtCGTCGGTTCAAATCCGGCCCCCGCAACCA chr.trna35-MetCAT Sc: 86.07

Phe tRNAs

>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCCCGGATAGCTCAGTCGGTAGAGCAGGGGATTGAAAATCCCCGT...........GtCCTTGGTTCGATTCCGAGTCCGGGCACCA chr.trna62-PheGAA Sc: 84.11 GCCCGGATAGCTCAGTCGGTAGAGCAGGGGATTGAAAATCCCCGT...........GtCCTTGGTTCGATTCCGAGTCCGGGCACCA chr.trna38-PheGAA Sc: 84.11

Pro tRNAs

>>>>>>>..>>>>.........<<<<.>>>.>.......<.<<<................>>>>>.......<<<<<<<<<<<<.... CGGCACGTAGCGCAGCCtGGTAGCGCACCGTCATGGGGTGTCGGGG...........GtCGGAGGTTCAAATCCTCTCGTGCCGACCA chr.trna29-ProGGG Sc: 77.97 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... CGGTGATTGGCGCAGCCtGGTAGCGCACTTCGTTCGGGACGAAGGG...........GtCGGAGGTTCGAATCCTCTATCACCGACCA chr.trna63-ProCGG Sc: 85.12 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... CGGCGAGTAGCGCAGCTtGGTAGCGCAACTGGTTTGGGACCAGTGG...........GtCGGAGGTTCGAATCCTCTCTCGCCGACCA chr.trna47-ProTGG Sc: 92.73

SeC tRNAs

.>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<..>>>>>>>....<<<<<<<..>>>>>.......<<<<<<<<<<<<.... gGAAGATCGTCGTCTCCGGTgA.GGCGGCTGGACTTCAAATCCAGTTGGGGCCGCCAGCGGTCCCGGGCAGGTTCGACTCCTGTGATCTTCC... chr.trna40-SeC(p)TCA Sc: 75.19

Ser tRNAs

>>>>>>>..>>>............<<<.>>>>>.......<<<<<..>>>>>.........<<<<<..>>>>>.......<<<<<..<<<<<<<.... GGTGAGGTGTCCGAGTGGCtgA.AGGAGCACGCCTGGAAAGTGTGT.ATACG..GCAA...CGTAT.CGGGGGTTCGAATCCCCC..CCTCACCGCCA chr.trna28-SerGGA Sc: 68.60 GGTGAGGTGTCCGAGTGGCtgA.AGGAGCACGCCTGGAAAGTGTGT.ATACG..GCAA...CGTAT.CGGGGGTTCGAATCCCCC..CCTCACCGCCA chr.trna26-SerGGA Sc: 68.60 >>>>>>>..>>>............<<<.>>>>>.......<<<<<..>>>>>>.......<<<<<<..>>>>>.......<<<<<..<<<<<<<.... GGAGAGATGCCGGAGCGGCtgA.ACGGACCGGTCTCGAAAACCGGA.GTGGGG.GCAA..CTCCAC.CGGGGGTTCAAATCCCCC..TCTCTCCGCCA chr.trna16-SerCGA Sc: 75.97 >>>>>>>..>>>............<<<.>>>>>.......<<<<<..>>>>...........<<<<..>>>>>.......<<<<<..<<<<<<<.... GGAAGTGTGGCCGAGCGGTtgA.AGGCACCGGTCTTGAAAACCGGCGACCC...GAAA....GGGTTCCAGAGTTCGAATCTCTG..CGCTTCCGCCA chr.trna27-SerTGA Sc: 76.89 >>>>>>>..>>>............<<<.>>>>>.......<<<<<..>>>>>>>.....<<<<<<<..>>>>>.......<<<<<..<<<<<<<.... GGTGAGGTGGCCGAGAGGCtgA.AGGCGCTCCCCTGCTAAGGGAGT.ATGCGGTCAAAaGCTGCAT.CCGGGGTTCGAATCCCCG..CCTCACCGCCA chr.trna70-SerGCT Sc: 72.46

Sup tRNAs

Thr tRNAs

>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCTGATATAGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGAG...........GtCGGCAGTTCGAATCTGCCTATCAGCACCA chr.trna53-ThrGGT Sc: 94.75 GCTGATATGGCTCAGTTGGTAGAGCGCACCCTTGGTAAGGGTGAG...........GtCCCCAGTTCGACTCTGGGTATCAGCACCA chr.trna66-ThrGGT Sc: 88.70 >>>>>>>..>>>>........<<<<..>>>>.......<<<<.................>>>>>.......<<<<<<<<<<<<.... GCCGATATAGCTCAGTTGGTAGAGCAGCGCATTCGTAATGCGAAG...........GtCGTAGGTTCGACTCCTATTATCGGCACCA chr.trna5-ThrCGT Sc: 91.49 >>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>.>.......<.<<<<<<<<<<.... GCCGACTTAGCTCAGTAGGTAGAGCAACTGACTTGTAATCAGTAG...........GtCACCAGTTCGATTCCGGTAGTCGGCACCA chr.trna50-ThrTGT Sc: 91.83 GCCGACTTAGCTCAGTAGGTAGAGCAACTGACTTGTAATCAGTAG...........GtCACCAGTTCGATTCCGGTAGTCGGCACCA chr.trna19-ThrTGT Sc: 91.83

Trp tRNAs

>>>>>>>..>>>>........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... AGGGGCGTAGTTCAATTGGTAGAGCACCGGTCTCCAAAACCGGGT...........GtTGGGAGTTCGAGTCTCTCCGCCCCTGCCA chr.trna43-TrpCCA Sc: 82.06

Tyr tRNAs

>>>>>>>..>>>............<<<.>>>>>.......<<<<<.>>>........<<<...>>>>>.......<<<<<.<<<<<<<.... GGTGGGGTTCCCGAGCGGCcaA.AGGGAGCAGACTGTAAATCTGCCGTCACA.....GACTtCGAAGGTTCGAATCCTTC.CCCCACCACCA chr.trna51-TyrGTA Sc: 67.63 GGTGGGGTTCCCGAGCGGCcaA.AGGGAGCAGACTGTAAATCTGCCGTCATC.....GACTtCGAAGGTTCGAATCCTTC.CCCCACCACCA chr.trna25-TyrGTA Sc: 66.93 GGTGGGGTTCCCGAGCGGCcaA.AGGGAGCAGACTGTAAATCTGCCGTCATC.....GACTtCGAAGGTTCGAATCCTTC.CCCCACCACCA chr.trna24-TyrGTA Sc: 66.93

Val tRNAs

>>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GCGTCCGTAGCTCAGTTGGTtAGAGCACCACCTTGACATGGTGGGG...........GtCGGTGGTTCGAGTCCACTCGGACGCACCA chr.trna80-ValGAC Sc: 96.76 GCGTTCATAGCTCAGTTGGTtAGAGCACCACCTTGACATGGTGGGG...........GtCGTTGGTTCGAGTCCAATTGAACGCACCA chr.trna79-ValGAC Sc: 92.34 >>>>>>>..>>>>.........<<<<.>>>>>.......<<<<<................>>>>>.......<<<<<<<<<<<<.... GGGTGATTAGCTCAGCTGGG.AGAGCACCTCCCTTACAAGGAGGGG...........GtCGGCGGTTCGATCCCGTCATCACCCACCA chr.trna9-ValTAC Sc: 94.34 GGGTGATTAGCTCAGCTGGG.AGAGCACCTCCCTTACAAGGAGGGG...........GtCGGCGGTTCGATCCCGTCATCACCCACCA chr.trna33-ValTAC Sc: 94.34 GGGTGATTAGCTCAGCTGGG.AGAGCACCTCCCTTACAAGGAGGGG...........GtCGGCGGTTCGATCCCGTCATCACCCACCA chr.trna32-ValTAC Sc: 94.34 GGGTGATTAGCTCAGCTGGG.AGAGCACCTCCCTTACAAGGAGGGG...........GtCGGCGGTTCGATCCCGTCATCACCCACCA chr.trna31-ValTAC Sc: 94.34 GGGTGATTAGCTCAGCTGGG.AGAGCACCTCCCTTACAAGGAGGGG...........GtCGGCGGTTCGATCCCGTCATCACCCACCA chr.trna11-ValTAC Sc: 94.34

The Genomic tRNA Database is curated by Todd Lowe and Patricia Chan. Please email lowe@soe.ucsc.edu with any questions and comments. To submit corrections, please use our Bug and Request Tracking System.