GtRNAdb

tRNAscan-SE Analysis of Gorilla gorilla gorilla (gorilla) (gorGor3.1 May 2011)

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tRNA Gene Summary




tRNAs Decoding Standard 20 AA387
Selenocysteine tRNAs (TCA)2
Possible suppressor tRNAs (CTA,TTA)0
tRNAs with undetermined
or unknown isotypes
0
Predicted pseudogenes0
Total tRNAs389


Intron Summary

tRNAs with introns
32
Pro
AGG
1
Val
TAC
1
Arg
TCT
5
Leu
CAA
6
Ile
TAT
5
Tyr
ATA
1
Tyr
GTA
13


Four Box tRNA Sets

IsotypetRNA Count by AnticodonTotal
AlaAGC
20
GGC
1
CGC
4
TGC
6
31
GlyACC
 
GCC
10
CCC
9
TCC
3
22
ProAGG
9
GGG
 
CGG
4
TGG
6
19
ThrAGT
8
GGT
 
CGT
4
TGT
6
18
ValAAC
6
GAC
 
CAC
10
TAC
7
23

Six Box tRNA Sets

IsotypetRNA Count by AnticodonTotal
SerAGA
9
GGA
 
CGA
4
TGA
4
ACT
 
GCT
8
 
 
 
 
25
ArgACG
7
GCG
 
CCG
5
TCG
6
 
 
 
 
CCT
6
TCT
6
30
LeuAAG
8
GAG
 
CAG
4
TAG
3
 
 
 
 
CAA
6
TAA
6
27

Two Box tRNA Sets

IsotypetRNA Count by AnticodonTotal
PheAAA
 
GAA
8
 
 
 
 
8
AsnATT
 
GTT
23
 
 
 
 
23
Lys 
 
 
 
CTT
10
TTT
11
21
AspATC
 
GTC
15
 
 
 
 
15
Glu 
 
 
 
CTC
5
TTC
10
15
HisATG
 
GTG
8
 
 
 
 
8
Gln 
 
 
 
CTG
12
TTG
6
18

Two Box & Other tRNA Sets

IsotypetRNA Count by AnticodonTotal
IleAAT
11
GAT
2
 
 
TAT
6
19
Met 
 
 
 
CAT
16
 
 
16
TyrATA
1
GTA
13
 
 
 
 
14
Supres 
 
 
 
CTA
 
TTA
 
0
CysACA
1
GCA
27
 
 
 
 
28
Trp 
 
 
 
CCA
7
 
 
7
SelCys 
 
 
 
 
 
TCA
2
2

The Genomic tRNA Database is curated by Todd Lowe and Patricia Chan. Please email lowe@soe.ucsc.edu with any questions and comments. To submit corrections, please use our Bug and Request Tracking System.