GtRNAdb

tRNAscan-SE Analysis of Leishmania major (Version 5.0)

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tRNA Gene Summary





tRNAs Decoding Standard 20 AA82
Selenocysteine tRNAs (TCA)0
Possible suppressor tRNAs (CTA,TTA)0
tRNAs with undetermined
or unknown isotypes
0
Predicted pseudogenes1
Total tRNAs83


Intron Summary

tRNAs with introns
3
Tyr
GTA
3


Four Box tRNA Sets

IsotypetRNA Count by AnticodonTotal
AlaAGC
2
GGC
 
CGC
2
TGC
1
5
GlyACC
 
GCC
4
CCC
1
TCC
1
6
ProAGG
2
GGG
 
CGG
2
TGG
1
5
ThrAGT
3
GGT
 
CGT
2
TGT
1
6
ValAAC
2
GAC
 
CAC
2
TAC
1
5

Six Box tRNA Sets

IsotypetRNA Count by AnticodonTotal
SerAGA
1
GGA
 
CGA
1
TGA
1
ACT
 
GCT
2
 
 
 
 
5
ArgACG
4
GCG
 
CCG
1
TCG
1
 
 
 
 
CCT
1
TCT
1
8
LeuAAG
3
GAG
 
CAG
2
TAG
1
 
 
 
 
CAA
1
TAA
1
8

Two Box tRNA Sets

IsotypetRNA Count by AnticodonTotal
PheAAA
 
GAA
2
 
 
 
 
2
AsnATT
 
GTT
3
 
 
 
 
3
Lys 
 
 
 
CTT
3
TTT
1
4
AspATC
 
GTC
3
 
 
 
 
3
Glu 
 
 
 
CTC
2
TTC
1
3
HisATG
 
GTG
2
 
 
 
 
2
Gln 
 
 
 
CTG
3
TTG
1
4

Two Box & Other tRNA Sets

IsotypetRNA Count by AnticodonTotal
IleAAT
3
GAT
 
 
 
TAT
1
4
Met 
 
 
 
CAT
4
 
 
4
TyrATA
 
GTA
3
 
 
 
 
3
Supres 
 
 
 
CTA
 
TTA
 
0
CysACA
 
GCA
1
 
 
 
 
1
Trp 
 
 
 
CCA
1
 
 
1
SelCys 
 
 
 
 
 
TCA
 
0

The Genomic tRNA Database is curated by Todd Lowe and Patricia Chan. Please email lowe@soe.ucsc.edu with any questions and comments. To submit corrections, please use our Bug and Request Tracking System.