GtRNAdb

tRNAscan-SE Analysis of Meleagris gallopavo (turkey) (TGC Turkey_2.01 Dec 2009)

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tRNA Gene Summary




tRNAs Decoding Standard 20 AA155
Selenocysteine tRNAs (TCA)0
Possible suppressor tRNAs (CTA,TTA)0
tRNAs with undetermined
or unknown isotypes
1
Predicted pseudogenes0
Total tRNAs156


Intron Summary

tRNAs with introns
10
Arg
TCT
1
Leu
CAA
2
Ile
TAT
1
Tyr
GTA
6


Four Box tRNA Sets

IsotypetRNA Count by AnticodonTotal
AlaAGC
7
GGC
 
CGC
3
TGC
6
16
GlyACC
 
GCC
5
CCC
3
TCC
4
12
ProAGG
7
GGG
 
CGG
1
TGG
2
10
ThrAGT
4
GGT
 
CGT
 
TGT
2
6
ValAAC
3
GAC
1
CAC
3
TAC
2
9

Six Box tRNA Sets

IsotypetRNA Count by AnticodonTotal
SerAGA
5
GGA
 
CGA
1
TGA
3
ACT
 
GCT
6
 
 
 
 
15
ArgACG
2
GCG
 
CCG
2
TCG
1
 
 
 
 
CCT
3
TCT
3
11
LeuAAG
1
GAG
 
CAG
4
TAG
1
 
 
 
 
CAA
2
TAA
1
9

Two Box tRNA Sets

IsotypetRNA Count by AnticodonTotal
PheAAA
 
GAA
6
 
 
 
 
6
AsnATT
 
GTT
4
 
 
 
 
4
Lys 
 
 
 
CTT
3
TTT
4
7
AspATC
 
GTC
3
 
 
 
 
3
Glu 
 
 
 
CTC
6
TTC
5
11
HisATG
 
GTG
3
 
 
 
 
3
Gln 
 
 
 
CTG
1
TTG
1
2

Two Box & Other tRNA Sets

IsotypetRNA Count by AnticodonTotal
IleAAT
3
GAT
 
 
 
TAT
1
4
Met 
 
 
 
CAT
11
 
 
11
TyrATA
 
GTA
6
 
 
 
 
6
Supres 
 
 
 
CTA
 
TTA
 
0
CysACA
 
GCA
5
 
 
 
 
5
Trp 
 
 
 
CCA
5
 
 
5
SelCys 
 
 
 
 
 
TCA
 
0

The Genomic tRNA Database is curated by Todd Lowe and Patricia Chan. Please email lowe@soe.ucsc.edu with any questions and comments. To submit corrections, please use our Bug and Request Tracking System.