GtRNAdb

tRNAscan-SE Analysis of Saccharomyces cerevisiae

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tRNA Gene Summary





tRNAs Decoding Standard 20 AA286
Selenocysteine tRNAs (TCA)1
Possible suppressor tRNAs (CTA,TTA)0
tRNAs with undetermined
or unknown isotypes
2
Predicted pseudogenes6
Total tRNAs295


Intron Summary

tRNAs with introns
59
Pro
TGG
10
Ser
CGA
1
Ser
GCT
2
Leu
TAG
3
Leu
CAA
10
Phe
GAA
10
Lys
TTT
7
Ile
TAT
2
Tyr
GTA
8
Trp
CCA
6


Four Box tRNA Sets

IsotypetRNA Count by AnticodonTotal
AlaAGC
11
GGC
 
CGC
 
TGC
6
17
GlyACC
 
GCC
16
CCC
2
TCC
3
21
ProAGG
2
GGG
 
CGG
 
TGG
10
12
ThrAGT
11
GGT
 
CGT
1
TGT
5
17
ValAAC
14
GAC
 
CAC
2
TAC
3
19

Six Box tRNA Sets

IsotypetRNA Count by AnticodonTotal
SerAGA
11
GGA
 
CGA
1
TGA
4
ACT
 
GCT
2
 
 
 
 
18
ArgACG
7
GCG
 
CCG
1
TCG
 
 
 
 
 
CCT
1
TCT
12
21
LeuAAG
 
GAG
1
CAG
 
TAG
3
 
 
 
 
CAA
10
TAA
7
21

Two Box tRNA Sets

IsotypetRNA Count by AnticodonTotal
PheAAA
 
GAA
11
 
 
 
 
11
AsnATT
 
GTT
11
 
 
 
 
11
Lys 
 
 
 
CTT
14
TTT
8
22
AspATC
 
GTC
16
 
 
 
 
16
Glu 
 
 
 
CTC
2
TTC
15
17
HisATG
 
GTG
8
 
 
 
 
8
Gln 
 
 
 
CTG
1
TTG
9
10

Two Box & Other tRNA Sets

IsotypetRNA Count by AnticodonTotal
IleAAT
13
GAT
1
 
 
TAT
2
16
Met 
 
 
 
CAT
11
 
 
11
TyrATA
 
GTA
8
 
 
 
 
8
Supres 
 
 
 
CTA
 
TTA
 
0
CysACA
 
GCA
4
 
 
 
 
4
Trp 
 
 
 
CCA
6
 
 
6
SelCys 
 
 
 
 
 
TCA
1
1

The Genomic tRNA Database is curated by Todd Lowe and Patricia Chan. Please email lowe@soe.ucsc.edu with any questions and comments. To submit corrections, please use our Bug and Request Tracking System.