GtRNAdb

tRNAscan-SE Analysis of Sulfolobus islandicus Y G 57 14

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>> Genome Seq
Gene Family Analysis / Notes
Blast output of tRNAs against masked genome (likely missed tRNAs or fragments):

Sulfolobus_islandicus_Y_G_57_14_chr.trna6-TyrGTA	chr	96.15	26	1	0	62	87	884863	884838	1e-05	44.1
Sulfolobus_islandicus_Y_G_57_14_chr.trna11-MetCAT	chr	100.00	31	0	0	62	92	884866	884836	5e-11	61.9
Sulfolobus_islandicus_Y_G_57_14_chr.trna8-PheGAA	chr	96.77	31	1	0	44	74	884866	884836	9e-09	54.0
Sulfolobus_islandicus_Y_G_57_14_chr.trna38-GlnTTG	chr	97.78	45	1	0	29	73	1200513	1200469	4e-17	81.8
Sulfolobus_islandicus_Y_G_57_14_chr.trna46-GlnCTG	chr	100.00	45	0	0	29	73	1200513	1200469	2e-19	89.7
Sulfolobus_islandicus_Y_G_57_14_chr.trna11-MetCAT	chr	94.12	34	1	1	59	92	1462590	1462622	1e-05	44.1
Sulfolobus_islandicus_Y_G_57_14_chr.trna8-PheGAA	chr	96.88	32	0	1	43	74	1462592	1462622	5e-07	48.1
Sulfolobus_islandicus_Y_G_57_14_chr.trna11-MetCAT	chr	100.00	30	0	0	57	86	1465046	1465075	2e-10	60.0
Sulfolobus_islandicus_Y_G_57_14_chr.trna8-PheGAA	chr	96.15	26	1	0	43	68	1465050	1465075	9e-06	44.1
Sulfolobus_islandicus_Y_G_57_14_chr.trna12-GluTTC	chr	100.00	42	0	0	49	90	1505429	1505470	1e-17	83.8
Sulfolobus_islandicus_Y_G_57_14_chr.trna20-AspGTC	chr	97.30	37	1	0	36	72	1505433	1505469	2e-12	65.9
Sulfolobus_islandicus_Y_G_57_14_chr.trna5-GluCTC	chr	100.00	39	0	0	53	91	1505433	1505471	8e-16	77.8
Sulfolobus_islandicus_Y_G_57_14_chr.trna27-ThrGGT	chr	100.00	25	0	0	50	74	1505445	1505469	1e-07	50.1
Sulfolobus_islandicus_Y_G_57_14_chr.trna33-AlaTGC	chr	100.00	21	0	0	49	69	1505445	1505465	3e-05	42.1
Sulfolobus_islandicus_Y_G_57_14_chr.trna36-AlaGGC	chr	100.00	21	0	0	49	69	1505445	1505465	3e-05	42.1
Sulfolobus_islandicus_Y_G_57_14_chr.trna48-AlaCGC	chr	100.00	21	0	0	49	69	1505445	1505465	3e-05	42.1
Sulfolobus_islandicus_Y_G_57_14_chr.trna49-GlyCCC	chr	100.00	26	0	0	65	90	1505445	1505470	4e-08	52.0
Sulfolobus_islandicus_Y_G_57_14_chr.trna12-GluTTC	chr	97.67	43	0	1	48	90	1517593	1517634	2e-13	69.9
Sulfolobus_islandicus_Y_G_57_14_chr.trna20-AspGTC	chr	92.86	42	2	1	31	72	1517593	1517633	3e-08	52.0
Sulfolobus_islandicus_Y_G_57_14_chr.trna5-GluCTC	chr	95.45	44	1	1	48	91	1517593	1517635	1e-11	63.9
Sulfolobus_islandicus_Y_G_57_14_chr.trna38-GlnTTG	chr	100.00	45	0	0	29	73	1585824	1585780	2e-19	89.7
Sulfolobus_islandicus_Y_G_57_14_chr.trna46-GlnCTG	chr	97.78	45	1	0	29	73	1585824	1585780	4e-17	81.8
Sulfolobus_islandicus_Y_G_57_14_chr.trna21-HisGTG	chr	100.00	42	0	0	33	74	1838492	1838533	1e-17	83.8
Sulfolobus_islandicus_Y_G_57_14_chr.trna15-ArgTCT	chr	100.00	21	0	0	63	83	1838506	1838526	4e-05	42.1
Sulfolobus_islandicus_Y_G_57_14_chr.trna27-ThrGGT	chr	100.00	22	0	0	48	69	1838506	1838527	9e-06	44.1
Sulfolobus_islandicus_Y_G_57_14_chr.trna2-ProGGG	chr	100.00	21	0	0	70	90	1838506	1838526	5e-05	42.1
Sulfolobus_islandicus_Y_G_57_14_chr.trna33-AlaTGC	chr	100.00	22	0	0	47	68	1838506	1838527	9e-06	44.1
Sulfolobus_islandicus_Y_G_57_14_chr.trna34-ArgCCG	chr	100.00	21	0	0	48	68	1838506	1838526	3e-05	42.1
Sulfolobus_islandicus_Y_G_57_14_chr.trna35-ProCGG	chr	100.00	21	0	0	49	69	1838506	1838526	3e-05	42.1
Sulfolobus_islandicus_Y_G_57_14_chr.trna36-AlaGGC	chr	100.00	22	0	0	47	68	1838506	1838527	9e-06	44.1
Sulfolobus_islandicus_Y_G_57_14_chr.trna40-GlyGCC	chr	100.00	21	0	0	49	69	1838506	1838526	3e-05	42.1
Sulfolobus_islandicus_Y_G_57_14_chr.trna48-AlaCGC	chr	100.00	22	0	0	47	68	1838506	1838527	9e-06	44.1
Sulfolobus_islandicus_Y_G_57_14_chr.trna4-ArgTCG	chr	100.00	21	0	0	48	68	1838506	1838526	3e-05	42.1
Sulfolobus_islandicus_Y_G_57_14_chr.trna49-GlyCCC	chr	100.00	21	0	0	64	84	1838507	1838527	4e-05	42.1
Sulfolobus_islandicus_Y_G_57_14_chr.trna29-ProTGG	chr	96.00	25	1	0	42	66	1959786	1959762	3e-05	42.1
Sulfolobus_islandicus_Y_G_57_14_chr.trna6-TyrGTA	chr	96.00	25	1	0	63	87	2078968	2078944	4e-05	42.1
Sulfolobus_islandicus_Y_G_57_14_chr.trna8-PheGAA	chr	96.30	27	1	0	48	74	2078968	2078942	2e-06	46.1
Sulfolobus_islandicus_Y_G_57_14_chr.trna11-MetCAT	chr	94.44	36	2	0	57	92	2078977	2078942	3e-09	56.0
Sulfolobus_islandicus_Y_G_57_14_chr.trna11-MetCAT	chr	100.00	25	0	0	66	90	2083777	2083753	2e-07	50.1
Sulfolobus_islandicus_Y_G_57_14_chr.trna6-TyrGTA	chr	96.00	25	1	0	63	87	2083777	2083753	4e-05	42.1
Sulfolobus_islandicus_Y_G_57_14_chr.trna8-PheGAA	chr	96.00	25	1	0	48	72	2083777	2083753	3e-05	42.1
Sulfolobus_islandicus_Y_G_57_14_chr.trna27-ThrGGT	chr	100.00	45	0	0	31	75	2436716	2436760	2e-19	89.7
Sulfolobus_islandicus_Y_G_57_14_chr.trna44-ValTAC	chr	96.15	26	1	0	40	65	2436725	2436750	9e-06	44.1
Sulfolobus_islandicus_Y_G_57_14_chr.trna33-AlaTGC	chr	100.00	27	0	0	43	69	2436729	2436755	9e-09	54.0
Sulfolobus_islandicus_Y_G_57_14_chr.trna36-AlaGGC	chr	100.00	27	0	0	43	69	2436729	2436755	9e-09	54.0
Sulfolobus_islandicus_Y_G_57_14_chr.trna48-AlaCGC	chr	100.00	27	0	0	43	69	2436729	2436755	9e-09	54.0
Sulfolobus_islandicus_Y_G_57_14_chr.trna40-GlyGCC	chr	100.00	24	0	0	46	69	2436730	2436753	6e-07	48.1
Sulfolobus_islandicus_Y_G_57_14_chr.trna15-ArgTCT	chr	100.00	22	0	0	62	83	2436732	2436753	1e-05	44.1
Sulfolobus_islandicus_Y_G_57_14_chr.trna2-ProGGG	chr	100.00	22	0	0	69	90	2436732	2436753	1e-05	44.1
Sulfolobus_islandicus_Y_G_57_14_chr.trna34-ArgCCG	chr	100.00	22	0	0	47	68	2436732	2436753	9e-06	44.1
Sulfolobus_islandicus_Y_G_57_14_chr.trna35-ProCGG	chr	100.00	22	0	0	48	69	2436732	2436753	9e-06	44.1
Sulfolobus_islandicus_Y_G_57_14_chr.trna4-ArgTCG	chr	100.00	22	0	0	47	68	2436732	2436753	9e-06	44.1
Sulfolobus_islandicus_Y_G_57_14_chr.trna21-HisGTG	chr	100.00	22	0	0	47	68	2436733	2436754	9e-06	44.1
Sulfolobus_islandicus_Y_G_57_14_chr.trna49-GlyCCC	chr	100.00	26	0	0	64	89	2436734	2436759	4e-08	52.0
Sulfolobus_islandicus_Y_G_57_14_chr.trna12-GluTTC	chr	100.00	25	0	0	65	89	2436735	2436759	2e-07	50.1
Sulfolobus_islandicus_Y_G_57_14_chr.trna20-AspGTC	chr	100.00	25	0	0	48	72	2436735	2436759	1e-07	50.1
Sulfolobus_islandicus_Y_G_57_14_chr.trna5-GluCTC	chr	100.00	25	0	0	65	89	2436735	2436759	2e-07	50.1
Sulfolobus_islandicus_Y_G_57_14_chr.trna27-ThrGGT	chr	94.59	37	1	1	33	68	2442682	2442718	1e-07	50.1
Sulfolobus_islandicus_Y_G_57_14_chr.trna33-AlaTGC	chr	96.00	25	1	0	43	67	2442694	2442718	3e-05	42.1
Sulfolobus_islandicus_Y_G_57_14_chr.trna36-AlaGGC	chr	96.00	25	1	0	43	67	2442694	2442718	3e-05	42.1
Sulfolobus_islandicus_Y_G_57_14_chr.trna48-AlaCGC	chr	96.00	25	1	0	43	67	2442694	2442718	3e-05	42.1

The Genomic tRNA Database is curated by Todd Lowe and Patricia Chan. Please email lowe@soe.ucsc.edu with any questions and comments. To submit corrections, please use our Bug and Request Tracking System.